RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TMEM203Q969S6 136 aa10.3□□□□□ -0.76
UBA3-210ENST00000485424 CYYR1Q96J86 154 aa10.3□□□□□ -0.76
UBA3-210ENST00000485424 CLCC1Q96S66 551 aa10.3□□□□□ -0.76
UBA3-210ENST00000485424 CMSS1Q9BQ75 279 aaKnown RBP10.3□□□□□ -0.76
UBA3-210ENST00000485424 CCDC90BQ9GZT6 254 aa10.3□□□□□ -0.76
UBA3-210ENST00000485424 ISYNA1Q9NPH2 558 aa10.3□□□□□ -0.76
UBA3-210ENST00000485424 AK3Q9UIJ7 227 aa10.3□□□□□ -0.76
UBA3-210ENST00000485424 SMAD5-AS1Q9Y6J3 95 aa10.3□□□□□ -0.76
UBA3-210ENST00000485424 STARD9Q9P2P6 4700 aa10.3□□□□□ -0.76
UBA3-210ENST00000485424 LINC01619G3V211 115 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 SOCS1O15524 211 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 NAPSAO96009 420 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 APOA2P02652 100 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 UCHL1P09936 223 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 PSMA1P25786 263 aaKnown RBP10.29□□□□□ -0.76
UBA3-210ENST00000485424 GNB1P62873 340 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 ZNF880Q6PDB4 577 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 UNQ5815/PRO19632Q6UWF5 114 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 DCUN1D4Q92564 292 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 TSNAXQ99598 290 aaKnown RBP10.29□□□□□ -0.76
UBA3-210ENST00000485424 ASCL2Q99929 193 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 RNF5Q99942 180 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 LPAR5Q9H1C0 372 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 C12orf4Q9NQ89 552 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 METTL1Q9UBP6 276 aaKnown RBP10.29□□□□□ -0.76
UBA3-210ENST00000485424 SCOCQ9UIL1 159 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 TNCP24821 2201 aa10.29□□□□□ -0.76
UBA3-210ENST00000485424 H0YJW9 148 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 SLC17A2O00624 439 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 ITGB1BP1O14713 200 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 CT45A6P0DMU7 189 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 CT45A5P0DMU8 189 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 CT45A7P0DMV0 189 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 VEGFCP49767 419 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 TPPP2P59282 170 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 RPS16P62249 146 aaKnown RBP10.28□□□□□ -0.76
UBA3-210ENST00000485424 CX3CL1P78423 397 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 PITPNAQ00169 270 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 CBX3Q13185 183 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 ACTBL2Q562R1 376 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 PPP1R27Q86WC6 154 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 MINDY2Q8NBR6 621 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 OR56B1Q8NGI3 324 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 OR6Q1Q8NGQ2 317 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 FLYWCH2Q96CP2 140 aaKnown RBP10.28□□□□□ -0.76
UBA3-210ENST00000485424 HDHD3Q9BSH5 251 aaPredicted RBP10.28□□□□□ -0.76
UBA3-210ENST00000485424 ZNF355PQ9NSJ1 428 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 OR1A1Q9P1Q5 309 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 HSF4Q9ULV5 492 aa10.28□□□□□ -0.76
UBA3-210ENST00000485424 LSM2Q9Y333 95 aaKnown RBP10.28□□□□□ -0.76
UBA3-210ENST00000485424 AK6Q9Y3D8 172 aaKnown RBP10.28□□□□□ -0.76
UBA3-210ENST00000485424 TRBV6-6A0A0A6YYG2 114 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 ERICH4A6NGS2 130 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 C3orf84H3BNL1 204 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 RGS10O43665 173 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 LGALS1P09382 135 aaKnown RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 CALRP27797 417 aaKnown RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 PSMD7P51665 324 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 SLURP1P55000 103 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 RPS25P62851 125 aaKnown RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 QRFPP83859 136 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 KIAA0141Q14154 515 aaPredicted RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 PDPNQ86YL7 162 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 CASTOR1Q8WTX7 329 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 OR4C12Q96R67 309 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 FAM103A1Q9BTL3 118 aaKnown RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 C11orf54Q9H0W9 315 aaPredicted RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 ALX4Q9H161 411 aaPredicted RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 Q9N2K0 584 aa10.27□□□□□ -0.77
UBA3-210ENST00000485424 RBM7Q9Y580 266 aaKnown RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 EPPK1P58107 5090 aaKnown RBP10.27□□□□□ -0.77
UBA3-210ENST00000485424 A0A0A6YYD4 124 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 DENRO43583 198 aaKnown RBP10.26□□□□□ -0.77
UBA3-210ENST00000485424 SPDEFO95238 335 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 CNIH1O95406 144 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 CA2P00918 260 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 IGHV3-11P01762 117 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 TFAP2AP05549 437 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 SCTP09683 121 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 CD3GP09693 182 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 OR8U9P0C7N5 309 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 CRIP2P52943 208 aaPredicted RBP10.26□□□□□ -0.77
UBA3-210ENST00000485424 NDPQ00604 133 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 MLLT11Q13015 90 aaPredicted RBP10.26□□□□□ -0.77
UBA3-210ENST00000485424 AKIRIN2Q53H80 203 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 DRAXINQ8NBI3 349 aaPredicted RBP10.26□□□□□ -0.77
UBA3-210ENST00000485424 LFNGQ8NES3 379 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 OR5AN1Q8NGI8 311 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 ARPC1AQ92747 370 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 DLX4Q92988 240 aaPredicted RBP10.26□□□□□ -0.77
UBA3-210ENST00000485424 ARHGAP5-AS1Q96IT6 56 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 MS4A10Q96PG2 267 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 ELOVL1Q9BW60 279 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 PECRQ9BY49 303 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 TOLLIPQ9H0E2 274 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 PARP12Q9H0J9 701 aaKnown RBP10.26□□□□□ -0.77
UBA3-210ENST00000485424 SLA2Q9H6Q3 261 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 SLC35D1Q9NTN3 355 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 FBXO7Q9Y3I1 522 aa10.26□□□□□ -0.77
UBA3-210ENST00000485424 NUBP2Q9Y5Y2 271 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms