RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 H1F0P07305 194 aaKnown RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 CECR9P0C854 216 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 IGHV4-31P0DP07 118 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 IGFBP3P17936 291 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 FMO3P31513 532 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 EIF2B2P49770 351 aaKnown RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 SULT1A1P50225 295 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 SULT1A2P50226 295 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 FABP6P51161 128 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 DLX6P56179 175 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF616Q08AN1 781 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 SMAGPQ0VAQ4 97 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 DOC2BQ14184 412 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NEDD8Q15843 81 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF181Q2M3W8 571 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF585BQ52M93 769 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 KCTD18Q6PI47 426 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 RASSF6Q6ZTQ3 369 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 C10orf82Q8WW14 230 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 NABP1Q96AH0 204 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 EEF1AKMT3Q96AZ1 226 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 ZMYND19Q96E35 227 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 AURKBQ96GD4 344 aaPredicted RBP4.32□□□□□ -1.72
CCDC39-205ENST00000485055 C20orf144Q9BQM9 153 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 RHNO1Q9BSD3 238 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 CCDC32Q9BV29 185 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 TXNIPQ9H3M7 391 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 HSPB11Q9Y547 144 aa4.32□□□□□ -1.72
CCDC39-205ENST00000485055 MYO9AB2RTY4 2548 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 RHODO00212 210 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 MFNGO00587 321 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 GABRPO00591 440 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 NME4O00746 187 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF682O95780 498 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 HAND1O96004 215 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 GKN3PP0CG01 181 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 SELENOPP49908 381 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 HMGA2P52926 109 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 RAP1BP61224 184 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 RAP1AP62834 184 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 RUNX1Q01196 453 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 OR2F1Q13607 317 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 CTF1Q16619 201 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 PRR31Q5SQ13 230 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 ATAD3CQ5T2N8 411 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 ELP2Q6IA86 826 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF66Q6ZN08 573 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 PRIMA1Q86XR5 153 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 CIARTQ8N365 385 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-205ENST00000485055 CADM2Q8N3J6 435 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 OR4D11Q8NGI4 311 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 HPSE2Q8WWQ2 592 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 SEH1LQ96EE3 360 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 TMEM80Q96HE8 168 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 C7orf69Q9H7B7 122 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 SIAEQ9HAT2 523 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 ADGRL4Q9HBW9 690 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 CA10Q9NS85 328 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 CENPEQ02224 2701 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 TRBV4-1A0A0J9YWV2 114 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 A8MXK9 166 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 SLC16A7O60669 478 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 HSD17B1P14061 328 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 USF1P22415 310 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-205ENST00000485055 FOXG1P55316 489 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-205ENST00000485055 SMARCD3Q6STE5 483 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 C16orf82Q7Z2V1 217 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 CBLN2Q8IUK8 224 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 LINC00471Q8N535 108 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 TBX15Q96SF7 602 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 MCHR1Q99705 422 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 MEPEQ9NQ76 525 aaPredicted RBP4.31□□□□□ -1.72
CCDC39-205ENST00000485055 TP53TG1Q9Y2A0 90 aa4.31□□□□□ -1.72
CCDC39-205ENST00000485055 RBM7Q9Y580 266 aaKnown RBP4.31□□□□□ -1.72
CCDC39-205ENST00000485055 ARFGEF3Q5TH69 2177 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 CIB4A0PJX0 185 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 APOHP02749 345 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-205ENST00000485055 GABRR1P24046 479 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 F2RP25116 425 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 LGALS7P47929 136 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 SNRPD2P62316 118 aaKnown RBP4.3□□□□□ -1.72
CCDC39-205ENST00000485055 RPL8P62917 257 aaKnown RBP4.3□□□□□ -1.72
CCDC39-205ENST00000485055 FMODQ06828 376 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 RAB35Q15286 201 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 FAM27D1Q5T7N8 215 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF584Q8IVC4 421 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 SKA3Q8IX90 412 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 FAM168AQ92567 244 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 DLX4Q92988 240 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-205ENST00000485055 MRAP2Q96G30 205 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 PNRC2Q9NPJ4 139 aaKnown RBP4.3□□□□□ -1.72
CCDC39-205ENST00000485055 RASL12Q9NYN1 266 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 PKIGQ9Y2B9 76 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 A0A0G2JMP0 313 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 A0A1W2PRG6 482 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 ARRDC5A6NEK1 342 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 OR5B21A6NL26 309 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 SNURFLB1AK76 121 aa4.3□□□□□ -1.72
CCDC39-205ENST00000485055 UBE2NP61088 152 aaKnown RBP4.3□□□□□ -1.72
CCDC39-205ENST00000485055 KCNJ8Q15842 424 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms