RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 WDR54Q9H977 334 aa16.66■□□□□ 0.26
RPUSD3-216ENST00000484134 TNRC6BQ9UPQ9 1833 aaKnown RBP16.66■□□□□ 0.26
RPUSD3-216ENST00000484134 A0A0U1RQK1 487 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 ZNF320A2RRD8 509 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 PMS2P5A8MQ11 134 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 NPIPB11E5RHQ5 1161 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 VENTXO95231 258 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 TMEM144Q7Z5S9 345 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 LINC01551Q86U37 167 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 DRAM1Q8N682 238 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 KCNE4Q8WWG9 221 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 TRAPPC1Q9Y5R8 145 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 PI4KAP42356 2102 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 RAMP3O60896 148 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 CRYAAP02489 173 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 MPLP40238 635 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 LRP11Q86VZ4 500 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 DERL1Q9BUN8 251 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 LIN7CQ9NUP9 197 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 PXMP4Q9Y6I8 212 aa16.65■□□□□ 0.26
RPUSD3-216ENST00000484134 C11orf94C9JXX5 98 aa16.64■□□□□ 0.26
RPUSD3-216ENST00000484134 TRAPPC6AO75865 159 aa16.64■□□□□ 0.26
RPUSD3-216ENST00000484134 PDGFBP01127 241 aaPredicted RBP16.64■□□□□ 0.26
RPUSD3-216ENST00000484134 LCN2P80188 198 aa16.64■□□□□ 0.26
RPUSD3-216ENST00000484134 TDRG1Q3Y452 100 aa16.64■□□□□ 0.26
RPUSD3-216ENST00000484134 Q6P435 159 aa16.64■□□□□ 0.26
RPUSD3-216ENST00000484134 ZNF114Q8NC26 417 aa16.64■□□□□ 0.26
RPUSD3-216ENST00000484134 LRP5LA4QPB2 252 aa16.64■□□□□ 0.25
RPUSD3-216ENST00000484134 PGPEP1LA6NFU8 196 aa16.64■□□□□ 0.25
RPUSD3-216ENST00000484134 RPL29P47914 159 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-216ENST00000484134 GNB1P62873 340 aa16.64■□□□□ 0.25
RPUSD3-216ENST00000484134 KCNIP4Q6PIL6 250 aa16.64■□□□□ 0.25
RPUSD3-216ENST00000484134 TCF23Q7RTU1 214 aa16.64■□□□□ 0.25
RPUSD3-216ENST00000484134 MS4A10Q96PG2 267 aa16.64■□□□□ 0.25
RPUSD3-216ENST00000484134 HSPB7Q9UBY9 170 aa16.64■□□□□ 0.25
RPUSD3-216ENST00000484134 C1QTNF9P0C862 333 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 LINC00596Q86U02 117 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 AGBL5Q8NDL9 886 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 WDYHV1Q96HA8 205 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 RBM14Q96PK6 669 aaKnown RBP16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 TMEM147Q9BVK8 224 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 FAM186AA6NE01 2351 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 A6NNC1 897 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 FAM90A26D6RGX4 464 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 SS18L1O75177 396 aaPredicted RBP16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 KRASP01116 189 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 G6PCP35575 357 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 CST9LP1Q5W188 147 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 APOBEC3DQ96AK3 386 aaPredicted RBP16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 TBX15Q96SF7 602 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 NPCDR1Q9BY65 106 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 R4GN57 208 aa16.63■□□□□ 0.25
RPUSD3-216ENST00000484134 CACNA1DQ01668 2161 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 SRFP11831 508 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 OR10J1P30954 320 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 FAM53AQ6NSI3 398 aaPredicted RBP16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 SDSLQ96GA7 329 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 HPRT1P00492 218 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 MBP02144 154 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 CYC1P08574 325 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 COX5AP20674 150 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 ATP5G3P48201 142 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 ZDHHC16Q969W1 377 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 FSCN3Q9NQT6 498 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 DEPPQ9NTK1 212 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 DCAF16Q9NXF7 216 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 IL17BQ9UHF5 180 aa16.62■□□□□ 0.25
RPUSD3-216ENST00000484134 ZNF705FA8MVS1 300 aaPredicted RBP16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 SIRPB1O00241 398 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 ZNF705DP0CH99 300 aaPredicted RBP16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 ZNF705BP0CI00 300 aaPredicted RBP16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 UBE2G2P60604 165 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 GTF3C1Q12789 2109 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 GCSAMLQ5JQS6 135 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 DCAF10Q5QP82 559 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 R3HDM4Q96D70 268 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 TMEM208Q9BTX3 173 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 RBFOX2O43251 390 aaKnown RBP eCLIP16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 ZG16O60844 167 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 MRPL33O75394 65 aaKnown RBP16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 NDUFB4O95168 129 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 P04436 131 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 P0C879 139 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 PPP1CBP62140 327 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 RPL30P62888 115 aaKnown RBP16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 ZNF705AQ6ZN79 300 aaPredicted RBP16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 C5orf30Q96GV9 206 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 OR51B6Q9H340 312 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 TRAPPC2LQ9UL33 140 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 TP53TG3Q9ULZ0 132 aa16.61■□□□□ 0.25
RPUSD3-216ENST00000484134 GRIFINA4D1Z8 144 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 PINLYPA6NC86 204 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 YPEL1O60688 119 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 ADMP35318 185 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 RAB30Q15771 203 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 ATP6V1FQ16864 119 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 ZNF497Q6ZNH5 498 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 YPEL2Q96QA6 119 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 ELOVL5Q9NYP7 299 aa16.6■□□□□ 0.25
RPUSD3-216ENST00000484134 ODAMA1E959 279 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms