RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 AMMECR1Q9Y4X0 333 aaPredicted RBP11.45□□□□□ -0.58
SMAD9-204ENST00000483941 KIAA2026Q5HYC2 2103 aa11.45□□□□□ -0.58
SMAD9-204ENST00000483941 IGKV1D-13A0A0B4J2D9 117 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 C9orf170A2RU37 121 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 IGKV1-13P0DP09 117 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 LCN2P80188 198 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 TAGLNQ01995 201 aaKnown RBP11.44□□□□□ -0.58
SMAD9-204ENST00000483941 PHLDA2Q53GA4 152 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 LIN54Q6MZP7 749 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 FAM71F2Q6NXP2 309 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 C5orf24Q7Z6I8 188 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 C12orf45Q8N5I9 185 aaPredicted RBP11.44□□□□□ -0.58
SMAD9-204ENST00000483941 ADAD2Q8NCV1 583 aaKnown RBP11.44□□□□□ -0.58
SMAD9-204ENST00000483941 OR10X1Q8NGY0 326 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 CD300LFQ8TDQ1 290 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 TMEM186Q96B77 213 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 C1orf159Q96HA4 380 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 AGMATQ9BSE5 352 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
SMAD9-204ENST00000483941 FAM212BQ9NTI7 297 aaPredicted RBP11.44□□□□□ -0.58
SMAD9-204ENST00000483941 ABCA1O95477 2261 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 hCG_2014768A0A024R1R8 64 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 TRAV20A0A0B4J274 112 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 C3orf85A0A1B0GTC6 90 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 HMX3A6NHT5 357 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 J3QR06 171 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 ST8SIA5O15466 376 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 PGLYRP1O75594 196 aaPredicted RBP11.43□□□□□ -0.58
SMAD9-204ENST00000483941 ATG12O94817 140 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 VSIG10L2P0DP72 767 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 PI3P19957 117 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 ZFP36P26651 326 aaKnown RBP11.43□□□□□ -0.58
SMAD9-204ENST00000483941 DVL1P1P54792 670 aaPredicted RBP11.43□□□□□ -0.58
SMAD9-204ENST00000483941 ARF6P62330 175 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 PPP1R1AQ13522 171 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 CT45A1Q5HYN5 189 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 TBC1D26Q86UD7 250 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 LDLRAD3Q86YD5 345 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 DRAM1Q8N682 238 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 ZNF439Q8NDP4 499 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 BEND2Q8NDZ0 799 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 CT45A3Q8NHU0 189 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 CHAC2Q8WUX2 184 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 MITD1Q8WV92 249 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 ASB13Q8WXK3 278 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 RNF150Q9ULK6 438 aa11.43□□□□□ -0.58
SMAD9-204ENST00000483941 DOCK11Q5JSL3 2073 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 H0Y980 276 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 PFDN1O60925 122 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 MMP23AO75900 390 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 MSMBP08118 114 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 RPA2P15927 270 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 F2RP25116 425 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 CEACAM3P40198 252 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 KIR2DS2P43631 304 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 GZMKP49863 264 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 GNG10P50151 68 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 RRAS2P62070 204 aaPredicted RBP11.42□□□□□ -0.58
SMAD9-204ENST00000483941 PAX2Q02962 417 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 CADM3Q8N126 398 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 LGI3Q8N145 548 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 LYG1Q8N1E2 194 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 C11orf42Q8N5U0 333 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 LINC01356Q8N9X3 169 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 CAPSLQ8WWF8 208 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 TMEM230Q96A57 120 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 SEC22CQ9BRL7 303 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 REG4Q9BYZ8 158 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 IFI27L2Q9H2X8 130 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 SDHAF2Q9NX18 166 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 PRELID3BQ9Y3B1 194 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 INSIG2Q9Y5U4 225 aa11.42□□□□□ -0.58
SMAD9-204ENST00000483941 IGHV2-26A0A0B4J1V2 119 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 A0A1B0GVG6 124 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 TXNL1O43396 289 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 TOX4O94842 621 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 IFNA21P01568 189 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 SERPINE2P07093 398 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 THBS3P49746 956 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 ZNF134P52741 427 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 OR11H6Q8NGC7 330 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 CASTOR1Q8WTX7 329 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 IL22RA2Q969J5 263 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 LPAR2Q9HBW0 351 aa11.41□□□□□ -0.58
SMAD9-204ENST00000483941 DSCAML1Q8TD84 2053 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 A0A0B4J293 547 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 DUXBA0A1W2PPF3 345 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 FAM157AC9JC47 383 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 J3QLI3 93 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 EPHA1P21709 976 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 ZNF137PP52743 207 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 PAX8Q06710 450 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 DCAF12L2Q5VW00 463 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 LRTM2Q8N967 370 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 UXS1Q8NBZ7 420 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 MAPK1IP1LQ8NDC0 245 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 LEAP2Q969E1 77 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 ABHD14BQ96IU4 210 aa11.4□□□□□ -0.58
SMAD9-204ENST00000483941 AIFM2Q9BRQ8 373 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms