RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 A0A1W2PPZ6 126 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 TNFSF10P50591 281 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 RPL15P61313 204 aaKnown RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 RNPS1Q15287 305 aaKnown RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 PEAR1Q5VY43 1037 aaPredicted RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 OR1K1Q8NGR3 316 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 OR4C12Q96R67 309 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 PSENENQ9NZ42 101 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 SMG1Q96Q15 3661 aaKnown RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 IGKV1-6A0A0C4DH72 117 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 GJE1A6NN92 205 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 CDX4O14627 284 aaPredicted RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 PSMB3P49720 205 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 FUT6P51993 359 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 MLF1P58340 268 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 OR2H1Q9GZK4 316 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 WNT5BQ9H1J7 359 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 SLC25A22Q9H936 323 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 GDF1P27539 372 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 OR5I1Q13606 314 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 DCAF12Q5T6F0 453 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 SPINK14Q6IE38 97 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 CT55Q8WUE5 264 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 PINX1Q96BK5 328 aaKnown RBP12.12□□□□□ -0.47
COL9A2-207ENST00000482722 GPR35Q9HC97 309 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 IL36GQ9NZH8 169 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 CRIM1Q9NZV1 1036 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 CACNG5Q9UF02 275 aa12.12□□□□□ -0.47
COL9A2-207ENST00000482722 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 UBE2L5PA0A1B0GUS4 154 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 ZNF320A2RRD8 509 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 ZNF716A6NP11 495 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 SYNGR2O43760 224 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 TUSC2O75896 110 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 PSG2P11465 335 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 F2RP25116 425 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 TFPI2P48307 235 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 TRA2AQ13595 282 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL9A2-207ENST00000482722 GGNQ86UU5 652 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 HES7Q9BYE0 225 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 OR2J1Q9GZK6 312 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 MANBALQ9NQG1 85 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 AURKAIP1Q9NWT8 199 aaPredicted RBP12.11□□□□□ -0.47
COL9A2-207ENST00000482722 TRAV39A0A0B4J263 110 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 hCG_38984A0A1B0GV85 526 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 B3GALT5-AS1P59052 145 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 TMEM42Q69YG0 159 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 KCNIP4Q6PIL6 250 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 PPP1R32Q7Z5V6 425 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
COL9A2-207ENST00000482722 IL1F10Q8WWZ1 152 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 C20orf144Q9BQM9 153 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 PAM16Q9Y3D7 125 aa12.11□□□□□ -0.47
COL9A2-207ENST00000482722 OR6C6A6NF89 314 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 C9orf172C9J069 976 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 YPEL1O60688 119 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 TNFSF13O75888 250 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 SERPINE2P07093 398 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
COL9A2-207ENST00000482722 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 ARL6IP6Q8N6S5 226 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 CPT1CQ8TCG5 803 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 TAF15Q92804 592 aaKnown RBP eCLIP12.1□□□□□ -0.47
COL9A2-207ENST00000482722 YPEL2Q96QA6 119 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 TCF21O43680 179 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 ZNF16P17020 682 aaPredicted RBP12.1□□□□□ -0.47
COL9A2-207ENST00000482722 GNG10P50151 68 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 GPM6AP51674 278 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 HBG1P69891 147 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 HBG2P69892 147 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 PRDX4Q13162 271 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 ATP1A1-AS1Q5TC04 95 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 ACSM6Q6P461 480 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 C20orf204Q6ZNR8 217 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 Q6ZWC4 215 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 CPEB3Q8NE35 698 aaKnown RBP12.1□□□□□ -0.47
COL9A2-207ENST00000482722 OR10V1Q8NGI7 309 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 SF3B5Q9BWJ5 86 aaKnown RBP12.1□□□□□ -0.47
COL9A2-207ENST00000482722 TMEM106BQ9NUM4 274 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 PXMP4Q9Y6I8 212 aa12.1□□□□□ -0.47
COL9A2-207ENST00000482722 GRIFINA4D1Z8 144 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 C1QTNF9BB2RNN3 333 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 HS3ST1O14792 307 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 CD59P13987 128 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 SRD5A2P31213 254 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 CLDN15P56746 228 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 LCN2P80188 198 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 SPANXN5Q5MJ07 72 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 ZNF488Q96MN9 340 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 OR51B6Q9H340 312 aa12.09□□□□□ -0.47
COL9A2-207ENST00000482722 RIMS4Q9H426 269 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms