RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 RAMP3O60896 148 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 IGLV1-40P01703 118 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 CHRNA7P36544 502 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 RANBP1P43487 201 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 PSMD7P51665 324 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 MRPS15P82914 257 aaKnown RBP17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 PLA2G7Q13093 441 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 DCTN2Q13561 401 aaKnown RBP17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 FHL3Q13643 280 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 PLAC9Q5JTB6 97 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 VAX1Q5SQQ9 334 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 GHITMQ9H3K2 345 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 ZNF221Q9UK13 617 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 BLOC1S6Q9UL45 172 aa17.29■□□□□ 0.36
GPCPD1-206ENST00000481690 PDCD5O14737 125 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 OR8U8P0C7N1 319 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 ECI1P42126 302 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 RAB9AP51151 201 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 CX3CL1P78423 397 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 KIAA0141Q14154 515 aaPredicted RBP17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 SSX1Q16384 188 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 ZNF260Q3ZCT1 412 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 ZNF660Q6AZW8 331 aaPredicted RBP17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 OR5AN1Q8NGI8 311 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 OR1N2Q8NGR9 330 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 PRR25Q96S07 402 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 CLCC1Q96S66 551 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 B9D2Q9BPU9 175 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 RAB22AQ9UL26 194 aa17.28■□□□□ 0.36
GPCPD1-206ENST00000481690 ERICH4A6NGS2 130 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 TRDCB7Z8K6 153 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 LDLRAD4O15165 306 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 RBBP9O75884 186 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 CD3GP09693 182 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 MYL9P24844 172 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 GNB1P62873 340 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 ZNF616Q08AN1 781 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 MINDY2Q8NBR6 621 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 CASTOR1Q8WTX7 329 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 RDH8Q9NYR8 311 aa17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 METTL1Q9UBP6 276 aaKnown RBP17.27■□□□□ 0.36
GPCPD1-206ENST00000481690 IGKV1-6A0A0C4DH72 117 aa17.26■□□□□ 0.35
GPCPD1-206ENST00000481690 I3L521 148 aa17.26■□□□□ 0.35
GPCPD1-206ENST00000481690 FCN1O00602 326 aa17.26■□□□□ 0.35
GPCPD1-206ENST00000481690 OR10A3P58181 314 aa17.26■□□□□ 0.35
GPCPD1-206ENST00000481690 PTX4Q96A99 478 aa17.26■□□□□ 0.35
GPCPD1-206ENST00000481690 RAB3CQ96E17 227 aa17.26■□□□□ 0.35
GPCPD1-206ENST00000481690 FAM103A1Q9BTL3 118 aaKnown RBP17.26■□□□□ 0.35
GPCPD1-206ENST00000481690 FOXA2Q9Y261 457 aaPredicted RBP17.26■□□□□ 0.35
GPCPD1-206ENST00000481690 A0A075B6Q4 140 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 BET1O15155 118 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 APOA2P02652 100 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 TFAP2AP05549 437 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 CRIP2P52943 208 aaPredicted RBP17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 RPS16P62249 146 aaKnown RBP17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 RUNX1Q01196 453 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 MOGAT2Q3SYC2 334 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 ASPHD1Q5U4P2 390 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 ZNF383Q8NA42 475 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 ALX4Q9H161 411 aaPredicted RBP17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 GAB2Q9UQC2 676 aa17.25■□□□□ 0.35
GPCPD1-206ENST00000481690 COL7A1Q02388 2944 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 SHISA3A0PJX4 238 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 M0R1X1 148 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 FABP7O15540 132 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 SOX15O60248 233 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 PROP1O75360 226 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 GADD45AP24522 165 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 LINC00205P59089 165 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 TMEM267Q0VDI3 215 aaPredicted RBP17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 PSG5Q15238 335 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 C19orf54Q5BKX5 351 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 UNQ5815/PRO19632Q6UWF5 114 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 PPP1R27Q86WC6 154 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 TCTEX1D1Q8N7M0 179 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 OR4A4PQ8NGN8 299 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 TSNAXQ99598 290 aaKnown RBP17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 RNF5Q99942 180 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 NDUFB11Q9NX14 153 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 SCOCQ9UIL1 159 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 KCNK7Q9Y2U2 307 aa17.24■□□□□ 0.35
GPCPD1-206ENST00000481690 TRAV1-2A0A0B4J238 106 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 CA2P00918 260 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 IGKV1-16P04430 117 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 FCGR3AP08637 254 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 GNB3P16520 340 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 SERPINB10P48595 397 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 PDPNQ86YL7 162 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 OR10R2Q8NGX6 335 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 MAFIPQ8WZ33 124 aa17.23■□□□□ 0.35
GPCPD1-206ENST00000481690 A0A0B4J203 849 aa17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 IFITM5A6NNB3 132 aa17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 LY86O95711 162 aa17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 EGR2P11161 476 aaPredicted RBP17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 SNRPBP14678 240 aaKnown RBP17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 RAB3BP20337 219 aa17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 ACTBL2Q562R1 376 aa17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 IGSF11Q5DX21 431 aa17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 OR10J5Q8NHC4 309 aa17.22■□□□□ 0.35
GPCPD1-206ENST00000481690 DCUN1D4Q92564 292 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms