RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 HSD17B6O14756 317 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 VSIG10L2P0DP72 767 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 HLA-GP17693 338 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 EPHA1P21709 976 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 VAMP1P23763 118 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 UCP1P25874 307 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 ARHGDIBP52566 201 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 ZNF816Q0VGE8 651 aaPredicted RBP8.29□□□□□ -1.08
USP39-215ENST00000481409 PPP1R1AQ13522 171 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 TMEM249Q2WGJ8 235 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 PHLDA2Q53GA4 152 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 CYB5R2Q6BCY4 276 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 DHRS7BQ6IAN0 325 aaPredicted RBP8.29□□□□□ -1.08
USP39-215ENST00000481409 CCDC144NLQ6NUI1 221 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 TBC1D26Q86UD7 250 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 ODF3L1Q8IXM7 274 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 CADM3Q8N126 398 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 LGI3Q8N145 548 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 LYG1Q8N1E2 194 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 ADAD2Q8NCV1 583 aaKnown RBP8.29□□□□□ -1.08
USP39-215ENST00000481409 ST6GALNAC6Q969X2 333 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 PARP12Q9H0J9 701 aaKnown RBP8.29□□□□□ -1.08
USP39-215ENST00000481409 MMP26Q9NRE1 261 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 ALG5Q9Y673 324 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 AUP1Q9Y679 476 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 CELSR2Q9HCU4 2923 aa8.29□□□□□ -1.08
USP39-215ENST00000481409 SAA2-SAA4A0A096LPE2 208 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 MEX3AA1L020 520 aaKnown RBP8.28□□□□□ -1.08
USP39-215ENST00000481409 HMX3A6NHT5 357 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 LEUTXA8MZ59 168 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 BUB1B-PAK6H3BSN5 160 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 GAPDHP04406 335 aaKnown RBP8.28□□□□□ -1.08
USP39-215ENST00000481409 SERPINE2P07093 398 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 SAA2P0DJI9 122 aaPredicted RBP8.28□□□□□ -1.08
USP39-215ENST00000481409 PI3P19957 117 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 HTR1DP28221 377 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 MC5RP33032 325 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 DUTP33316 252 aaKnown RBP8.28□□□□□ -1.08
USP39-215ENST00000481409 GNG10P50151 68 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 BCAP31P51572 246 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 LGALS4P56470 323 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 RRAS2P62070 204 aaPredicted RBP8.28□□□□□ -1.08
USP39-215ENST00000481409 SUPT4H1P63272 117 aaKnown RBP8.28□□□□□ -1.08
USP39-215ENST00000481409 CBX3Q13185 183 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 LIAT1Q6ZQX7 453 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 OR8H3Q8N146 312 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 PNKDQ8N490 385 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 C12orf45Q8N5I9 185 aaPredicted RBP8.28□□□□□ -1.08
USP39-215ENST00000481409 CAPSLQ8WWF8 208 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 ABHD14BQ96IU4 210 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 TMEM56Q96MV1 263 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 ZNF251Q9BRH9 671 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 TMEM222Q9H0R3 208 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 MED28Q9H204 178 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 RAB18Q9NP72 206 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 HIF1ANQ9NWT6 349 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 DPM3Q9P2X0 92 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 TMEM56-RWDD3S4R434 201 aa8.28□□□□□ -1.08
USP39-215ENST00000481409 APCP25054 2843 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 A0A0B4J293 547 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 DBX1A6NMT0 343 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 M0R1X1 148 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 SLC31A2O15432 143 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 SSNA1O43805 119 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 CDS2O95674 445 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 ARG1P05089 322 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 OR5AC1P0C628 307 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 IGHV4-31P0DP07 118 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 HOXB4P17483 251 aaPredicted RBP8.27□□□□□ -1.09
USP39-215ENST00000481409 RAB13P51153 203 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 TMEM187Q14656 261 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 LIN54Q6MZP7 749 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 FAM219AQ8IW50 185 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 OR4P4Q8NGL7 312 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 GLYATL2Q8WU03 294 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 LEAP2Q969E1 77 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 MALSU1Q96EH3 234 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 TBX15Q96SF7 602 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 RNF5Q99942 180 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 SEC22CQ9BRL7 303 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 SIRT7Q9NRC8 400 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 CACFD1Q9UGQ2 172 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 RNF150Q9ULK6 438 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 TMED3Q9Y3Q3 217 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 NAV2Q8IVL1 2488 aa8.27□□□□□ -1.09
USP39-215ENST00000481409 PRRC2AP48634 2157 aaKnown RBP8.27□□□□□ -1.09
USP39-215ENST00000481409 RNASEK-C17orf49H0YIS7 233 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 LY6LH3BQJ8 138 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 PROP1O75360 226 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 HPRT1P00492 218 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 TGFAP01135 160 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 IFNA21P01568 189 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 APOA2P02652 100 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 SULT1A3P0DMM9 295 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 SULT1A4P0DMN0 295 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 VDAC1P21796 283 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 CYCSP99999 105 aaKnown RBP8.26□□□□□ -1.09
USP39-215ENST00000481409 RTL8BQ17RB0 113 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 GPR157Q5UAW9 335 aa8.26□□□□□ -1.09
USP39-215ENST00000481409 HCP5Q6MZN7 132 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms