RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 KLF13Q9Y2Y9 288 aaPredicted RBP6.06□□□□□ -1.44
LSM5-210ENST00000480956 BCL9LQ86UU0 1499 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 GLI3P10071 1580 aa6.06□□□□□ -1.44
LSM5-210ENST00000480956 IGHV3-35A0A0C4DH35 117 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 KLLNB2CW77 178 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 CKS1BP61024 79 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 TMEM267Q0VDI3 215 aaPredicted RBP6.05□□□□□ -1.44
LSM5-210ENST00000480956 CLLU1OSQ5K130 101 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 DRAM1Q8N682 238 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 SLC25A44Q96H78 314 aaPredicted RBP6.05□□□□□ -1.44
LSM5-210ENST00000480956 FOPNLQ96NB1 174 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 C1orf50Q9BV19 199 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 SSR3Q9UNL2 185 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 SIPA1L3O60292 1781 aaPredicted RBP6.05□□□□□ -1.44
LSM5-210ENST00000480956 OVOS2A0A0G2JMS6 1433 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 KDM6AO15550 1401 aaPredicted RBP6.05□□□□□ -1.44
LSM5-210ENST00000480956 DYSFO75923 2080 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 C5P01031 1676 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 KDM3BQ7LBC6 1761 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 ITGB4P16144 1822 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 TRAPPC13A5PLN9 417 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 CD300LBA8K4G0 201 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 CDRT1O95170 752 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 CCNE2O96020 404 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 IGHMP01871 453 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 COX4I1P13073 169 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 GNB1P62873 340 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 CXCL6P80162 114 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 COL10A1Q03692 680 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 ERCC8Q13216 396 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 LY6DQ14210 128 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 PCSK4Q6UW60 755 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 IDO2Q6ZQW0 420 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 PRNTQ86SH4 94 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 DNAJC9Q8WXX5 260 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 CCDC32Q9BV29 185 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 PBDC1Q9BVG4 233 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 SAMD10Q9BYL1 202 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 NOX3Q9HBY0 568 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 PRTFDC1Q9NRG1 225 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 ACER3Q9NUN7 267 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 CTSZQ9UBR2 303 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 NEU3Q9UQ49 428 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 CCDC171Q6TFL3 1326 aa6.05□□□□□ -1.44
LSM5-210ENST00000480956 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.04□□□□□ -1.44
LSM5-210ENST00000480956 BRWD3Q6RI45 1802 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 DOCK7Q96N67 2140 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 INMT-MINDY4F8WBC2 141 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 K7EP13 123 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 GYG2O15488 501 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 ANGPTL7O43827 346 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 SS18L1O75177 396 aaPredicted RBP6.04□□□□□ -1.44
LSM5-210ENST00000480956 TNFSF13O75888 250 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 GPX2P18283 190 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 SDC4P31431 198 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 MP68P56378 58 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 CRADDP78560 199 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 NSDHLQ15738 373 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 ORMDL2Q53FV1 153 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 TCTEX1D4Q5JR98 221 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 GHSRQ92847 366 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 ROPN1LQ96C74 230 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 VPS25Q9BRG1 176 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 C2orf88Q9BSF0 95 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 MED29Q9NX70 200 aa6.04□□□□□ -1.44
LSM5-210ENST00000480956 EPOPA6NHQ4 379 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 OR5H1A6NKK0 313 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 COX7A2P2O60397 106 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 IGHG2P01859 326 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 SERPINE1P05121 402 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 OR4Q2P0C623 313 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 OR12D1P0DN82 309 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 MYH3P11055 1940 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 SPI1P17947 270 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 MEOX2P50222 304 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 IL15RAQ13261 267 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 CASC10Q5T4H9 136 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 C9orf64Q5T6V5 341 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 MDP1Q86V88 176 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 OR8B12Q8NGG6 310 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 LHFPL5Q8TAF8 219 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 CT55Q8WUE5 264 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 PGLYRP2Q96PD5 576 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 LINC00527Q9UJ94 153 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 RFNGQ9Y644 331 aa6.03□□□□□ -1.44
LSM5-210ENST00000480956 DISP2A7MBM2 1401 aa6.02□□□□□ -1.44
LSM5-210ENST00000480956 TNS2Q63HR2 1409 aa6.02□□□□□ -1.44
LSM5-210ENST00000480956 IGHV3OR16-10A0A075B7F0 116 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 TRAV26-2A0A0B4J265 109 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 ATP6V1G2-DDX39BF2Z307 99 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 H7C1C5 153 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 TCF21O43680 179 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 TDGF1P13385 188 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 TDGF1P3P51864 188 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 LCN6P62502 163 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 CDK5Q00535 292 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 FAM19A3Q7Z5A8 133 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 UMODL1-AS1Q8N2C9 162 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 ZNF649Q9BS31 505 aa6.02□□□□□ -1.45
LSM5-210ENST00000480956 KRTAP17-1Q9BYP8 105 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms