RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 TMEM203Q969S6 136 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 ORAI1Q96D31 301 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 RAB3CQ96E17 227 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 ABCG5Q9H222 651 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 MMP27Q9H306 513 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 PLGRKTQ9HBL7 147 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 Q9N2K0 584 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 LIN7CQ9NUP9 197 aaKnown RBP3.9□□□□□ -1.79
PTCD3-213ENST00000480102 TXNL4BQ9NX01 149 aaKnown RBP3.9□□□□□ -1.79
PTCD3-213ENST00000480102 TRAPPC2LQ9UL33 140 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 SLC45A2Q9UMX9 530 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 KCNK7Q9Y2U2 307 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 NBEAL1Q6ZS30 2694 aa3.9□□□□□ -1.79
PTCD3-213ENST00000480102 TRBV6-7A0A0A0MS04 114 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 A0A0A6YYD4 124 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 TMEM272A0A1B0GTI8 110 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 PNMA8CA0A1B0GUJ8 204 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 TRDCB7Z8K6 153 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 SDCBPO00560 298 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 HSD17B6O14756 317 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 RAB29O14966 203 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 KCNAB3O43448 404 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 CHST1O43916 411 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 GABARAPO95166 117 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 IGHG2P01859 326 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 HLA-DRB1P01911 266 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 OR5H8P0DN80 308 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 EGR2P11161 476 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 CD36P16671 472 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 RCC1P18754 421 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 MDKP21741 143 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 PSMB9P28065 219 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 CBX5P45973 191 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 RAB13P51153 203 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 SCN1BQ07699 218 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 C2orf68Q2NKX9 166 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 CT45A1Q5HYN5 189 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 PLAC9Q5JTB6 97 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 CCBE1Q6UXH8 406 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 C6orf201Q7Z4U5 140 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 NR2C2APQ86WQ0 139 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 NDUFA11Q86Y39 141 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 ODF3L1Q8IXM7 274 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 TCTEX1D1Q8N7M0 179 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 WFDC9Q8NEX5 89 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 NPBQ8NG41 125 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 OR2AK2Q8NG84 335 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 OR2T10Q8NGZ9 312 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 CT45A3Q8NHU0 189 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 C15orf40Q8WUR7 153 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 C17orf50Q8WW18 174 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 ACOT12Q8WYK0 555 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 LINC00476Q8WZB0 136 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 TOMM40LQ969M1 308 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 FAM46BQ96A09 425 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 SLC25A46Q96AG3 418 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 TMEM68Q96MH6 324 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 CMSS1Q9BQ75 279 aaKnown RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 SULT4A1Q9BR01 284 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF251Q9BRH9 671 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 ABHD14AQ9BUJ0 271 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 IFI27L2Q9H2X8 130 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 BANF2Q9H503 90 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF702PQ9H963 129 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 OR2S2Q9NQN1 319 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 PLSCR3Q9NRY6 295 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 ZFP57Q9NU63 452 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 GNG12Q9UBI6 72 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 RABL2AQ9UBK7 228 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 ANAPC10Q9UM13 185 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 SPATA2Q9UM82 520 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 RABL2BQ9UNT1 228 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 MOB4Q9Y3A3 225 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 AK6Q9Y3D8 172 aaKnown RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 SOX21Q9Y651 276 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-213ENST00000480102 WNK2Q9Y3S1 2297 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 TRRAPQ9Y4A5 3859 aa3.89□□□□□ -1.79
PTCD3-213ENST00000480102 HSPB6O14558 160 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 ARPC1BO15143 372 aaKnown RBP3.88□□□□□ -1.79
PTCD3-213ENST00000480102 SOCS1O15524 211 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 NDUFA3O95167 84 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 DUS4LO95620 317 aaKnown RBP3.88□□□□□ -1.79
PTCD3-213ENST00000480102 MOSP00540 346 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 OPN1MWP04001 364 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 FCGR3AP08637 254 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 OPN1MW2P0DN77 364 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 OPN1MW3P0DN78 364 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 RRASP10301 218 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 OMGP23515 440 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 LGALS7P47929 136 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF134P52741 427 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 UCP3P55916 312 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 HLA-DRB3P79483 266 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 MRPS15P82914 257 aaKnown RBP3.88□□□□□ -1.79
PTCD3-213ENST00000480102 C22orf42Q6IC83 251 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 ANKRD13BQ86YJ7 626 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 PDZD9Q8IXQ8 264 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 FAM71E2Q8N5Q1 922 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 C5orf56Q8N8D9 126 aa3.88□□□□□ -1.79
PTCD3-213ENST00000480102 OR13F1Q8NGS4 319 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms