RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 MYOZ3Q8TDC0 251 aa11.78□□□□□ -0.52
PRKN-207ENST00000479615 TOLLIPQ9H0E2 274 aa11.78□□□□□ -0.52
PRKN-207ENST00000479615 GAB2Q9UQC2 676 aa11.78□□□□□ -0.52
PRKN-207ENST00000479615 VSIG4Q9Y279 399 aa11.78□□□□□ -0.52
PRKN-207ENST00000479615 TMEM272A0A1B0GTI8 110 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 ATP6V0E1O15342 81 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 SPDEFO95238 335 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 CD40LGP29965 261 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 CRIP2P52943 208 aaPredicted RBP11.77□□□□□ -0.53
PRKN-207ENST00000479615 PLGLAQ15195 96 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 SSX1Q16384 188 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 RPL39P5Q59GN2 51 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 PLAC9Q5JTB6 97 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 C9orf66Q5T8R8 295 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 HES5Q5TA89 166 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 PYHIN1Q6K0P9 492 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 C18orf65Q6ZTR6 163 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 MINDY2Q8NBR6 621 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 OR10R2Q8NGX6 335 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 ABHD14BQ96IU4 210 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 CYYR1Q96J86 154 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 RITA1Q96K30 269 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 TSNAXQ99598 290 aaKnown RBP11.77□□□□□ -0.53
PRKN-207ENST00000479615 HDHD3Q9BSH5 251 aaPredicted RBP11.77□□□□□ -0.53
PRKN-207ENST00000479615 PARP11Q9NR21 331 aa11.77□□□□□ -0.53
PRKN-207ENST00000479615 FABP7O15540 132 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 SCGNO76038 276 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 APOA2P02652 100 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 TFAP2AP05549 437 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 OR8U8P0C7N1 319 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 FGF9P31371 208 aaPredicted RBP11.76□□□□□ -0.53
PRKN-207ENST00000479615 INSL3P51460 131 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 RAB25P57735 213 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 KRTAP10-11P60412 298 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 DGCR2P98153 550 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 FHL3Q13643 280 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 DEFB121Q5J5C9 76 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 UBE2UQ5VVX9 321 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 ZNF562Q6V9R5 426 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 TPRA1Q86W33 373 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 OR10J5Q8NHC4 309 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 RDH8Q9NYR8 311 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 OR1A1Q9P1Q5 309 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 WSB1Q9Y6I7 421 aa11.76□□□□□ -0.53
PRKN-207ENST00000479615 K7EIL1 84 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 ATP6V1G2O95670 118 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 CNTFRP26992 372 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 HOXD3P31249 432 aaPredicted RBP11.75□□□□□ -0.53
PRKN-207ENST00000479615 TALDO1P37837 337 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 LGALS7P47929 136 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 RAB9AP51151 201 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 CX3CL1P78423 397 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 CBX3Q13185 183 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 AKIRIN2Q53H80 203 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 Q6ZS49 121 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 ZNF491Q8N8L2 437 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 OR11H1Q8NG94 326 aa11.75□□□□□ -0.53
PRKN-207ENST00000479615 FLYWCH2Q96CP2 140 aaKnown RBP11.75□□□□□ -0.53
PRKN-207ENST00000479615 FOXA2Q9Y261 457 aaPredicted RBP11.75□□□□□ -0.53
PRKN-207ENST00000479615 TRBV6-7A0A0A0MS04 114 aa11.74□□□□□ -0.53
PRKN-207ENST00000479615 G3V318 75 aa11.74□□□□□ -0.53
PRKN-207ENST00000479615 RAB27BO00194 218 aa11.74□□□□□ -0.53
PRKN-207ENST00000479615 MFNGO00587 321 aa11.74□□□□□ -0.53
PRKN-207ENST00000479615 ARPC1BO15143 372 aaKnown RBP11.74□□□□□ -0.53
PRKN-207ENST00000479615 FCGR3AP08637 254 aa11.74□□□□□ -0.53
PRKN-207ENST00000479615 HIST1H1DP16402 221 aaKnown RBP11.74□□□□□ -0.53
PRKN-207ENST00000479615 CABLES2Q9BTV7 478 aa11.74□□□□□ -0.53
PRKN-207ENST00000479615 PARP12Q9H0J9 701 aaKnown RBP11.74□□□□□ -0.53
PRKN-207ENST00000479615 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
PRKN-207ENST00000479615 KCNK7Q9Y2U2 307 aa11.74□□□□□ -0.53
PRKN-207ENST00000479615 IGKV1-6A0A0C4DH72 117 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 NOTOA8MTQ0 251 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 I3L521 148 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 CTXN2P0C2S0 81 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 RRASP10301 218 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 DTYMKP23919 212 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 OR10A3P58181 314 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 RPS16P62249 146 aaKnown RBP11.73□□□□□ -0.53
PRKN-207ENST00000479615 PITPNAQ00169 270 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 ZNF616Q08AN1 781 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 KIAA0141Q14154 515 aaPredicted RBP11.73□□□□□ -0.53
PRKN-207ENST00000479615 PSG5Q15238 335 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 C22orf42Q6IC83 251 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
PRKN-207ENST00000479615 SPARTQ8N0X7 666 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 OR1N2Q8NGR9 330 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 TMEM68Q96MH6 324 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 SLA2Q9H6Q3 261 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.73□□□□□ -0.53
PRKN-207ENST00000479615 METTL1Q9UBP6 276 aaKnown RBP11.73□□□□□ -0.53
PRKN-207ENST00000479615 STUB1Q9UNE7 303 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 SSR3Q9UNL2 185 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 NUBP2Q9Y5Y2 271 aa11.73□□□□□ -0.53
PRKN-207ENST00000479615 WI2-2373I1.2A0A1W2PRP0 233 aa11.72□□□□□ -0.53
PRKN-207ENST00000479615 SEC14L6B5MCN3 397 aa11.72□□□□□ -0.53
PRKN-207ENST00000479615 M0R1X1 148 aa11.72□□□□□ -0.53
PRKN-207ENST00000479615 BET1O15155 118 aa11.72□□□□□ -0.53
PRKN-207ENST00000479615 PROP1O75360 226 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms