RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 KCNAB3O43448 404 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 MPC2O95563 127 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 IFNA21P01568 189 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 SAA2P0DJI9 122 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-206ENST00000477085 IGHV1-8P0DP01 117 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 PSMB6P28072 239 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 DUTP33316 252 aaKnown RBP11.82□□□□□ -0.52
COL4A6-206ENST00000477085 SRPXP78539 464 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 RAB32Q13637 225 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 TMEM30BQ3MIR4 351 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 NMSQ5H8A3 153 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 C11orf87Q6NUJ2 197 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 FAM216AQ8WUB2 273 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 IL22RA2Q969J5 263 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 BPESC1Q9GZL8 116 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 TMED3Q9Y3Q3 217 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 FXYD6-FXYD2A0A087WZ82 144 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 PPIAL4CA0A0B4J2A2 164 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 B3GALNT1O75752 331 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 IGKV1-5P01602 117 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 SERPINE2P07093 398 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 PPIAL4GP0DN37 164 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 ZFP36P26651 326 aaKnown RBP11.82□□□□□ -0.52
COL4A6-206ENST00000477085 KRTAP10-9P60411 292 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 IZUMO4Q1ZYL8 232 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 ZNF66Q6ZN08 573 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 LYG1Q8N1E2 194 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
COL4A6-206ENST00000477085 LIN7CQ9NUP9 197 aaKnown RBP11.82□□□□□ -0.52
COL4A6-206ENST00000477085 USP9YO00507 2555 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-206ENST00000477085 YLPM1P49750 1951 aaKnown RBP11.81□□□□□ -0.52
COL4A6-206ENST00000477085 A0A087X0M5 115 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 A0A1B0GX30 115 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 HMSDA8MTL9 139 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 KIAA1324LA8MWY0 1029 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-206ENST00000477085 M0R1X1 148 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 SLC25A4P12235 298 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 SSTR2P30874 369 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 LPAR6P43657 344 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 RAB7AP51149 207 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 GNB2P62879 340 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
COL4A6-206ENST00000477085 Q6ZRM9 215 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 HSD17B10Q99714 261 aaKnown RBP11.81□□□□□ -0.52
COL4A6-206ENST00000477085 SSBP3Q9BWW4 388 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-206ENST00000477085 OR5AC2Q9NZP5 309 aa11.81□□□□□ -0.52
COL4A6-206ENST00000477085 RNF212BA8MTL3 300 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 RAB29O14966 203 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 ARPC5O15511 151 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 IGHV2-5P01817 119 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 VDAC1P21796 283 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 LMO4P61968 165 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 FGL1Q08830 312 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 SPAG16Q8N0X2 631 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 Q8N7P7 452 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 OR4D5Q8NGN0 318 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 ZNF596Q8TC21 504 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 DDB2Q92466 427 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 GPR146Q96CH1 333 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 SLA2Q9H6Q3 261 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 COMMD9Q9P000 198 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 MBD2Q9UBB5 411 aa11.8□□□□□ -0.52
COL4A6-206ENST00000477085 MBPP02686 304 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-206ENST00000477085 ZNF816Q0VGE8 651 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-206ENST00000477085 TMEM65Q6PI78 240 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 ITGB1BP2Q9UKP3 347 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 CENPEQ02224 2701 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 LOC105371242A0A075B767 164 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 NBPF19A0A087WUL8 3843 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 DUXBA0A1W2PPF3 345 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 J3QR06 171 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 S1PR2O95136 353 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 LYL1P12980 280 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 PDLIM4P50479 330 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 DIAPH2-AS1Q14236 149 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 ZNF546Q86UE3 836 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 ABHD12Q8N2K0 398 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 ZNF383Q8NA42 475 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-206ENST00000477085 CLDND2Q8NHS1 167 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 RRNAD1Q96FB5 475 aaKnown RBP11.79□□□□□ -0.52
COL4A6-206ENST00000477085 TMEM133Q9H2Q1 129 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 TNFSF18Q9UNG2 199 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 SESN1Q9Y6P5 492 aa11.79□□□□□ -0.52
COL4A6-206ENST00000477085 P0C879 139 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 CT45A6P0DMU7 189 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 CT45A5P0DMU8 189 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 CT45A7P0DMV0 189 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 RPA2P15927 270 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 ATP5J2P56134 94 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 PAX2Q02962 417 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 CATR1Q13166 79 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 CXorf66Q5JRM2 361 aaPredicted RBP11.78□□□□□ -0.52
COL4A6-206ENST00000477085 FOXRED2Q8IWF2 684 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 LINC00311Q8N616 119 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 C8orf31Q8N9H6 132 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 OR1S1Q8NH92 325 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 HEXA-AS1Q9H8Q6 139 aa11.78□□□□□ -0.52
COL4A6-206ENST00000477085 RNF222A6NCQ9 220 aa11.77□□□□□ -0.52
COL4A6-206ENST00000477085 VWC2LB2RUY7 222 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms