RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 LY6G6CO95867 125 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 TFAP2AP05549 437 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 FSTP19883 344 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 RASSF2P50749 326 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 TMEM267Q0VDI3 215 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-219ENST00000476625 GPR176Q14439 515 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 Q499Y3 187 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 CCDC58Q4VC31 144 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 PYHIN1Q6K0P9 492 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 SVOPQ8N4V2 548 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 LINC00476Q8WZB0 136 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 C11orf54Q9H0W9 315 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-219ENST00000476625 RAB9BQ9NP90 201 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 SLC23A1Q9UHI7 598 aa9.05□□□□□ -0.96
HDAC6-219ENST00000476625 RPL36Q9Y3U8 105 aaKnown RBP9.05□□□□□ -0.96
HDAC6-219ENST00000476625 LOC100130705A0A1B0GUX0 176 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 OR5H14A6NHG9 310 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 RAB29O14966 203 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 ATP5HO75947 161 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 PRH1P02810 166 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 ZP3P21754 424 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 HTR2CP28335 458 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 RPS16P62249 146 aaKnown RBP9.04□□□□□ -0.96
HDAC6-219ENST00000476625 PMS2P11Q13670 270 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 MRGPRG-AS1Q2M3A8 158 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 RNLSQ5VYX0 342 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 ZNF562Q6V9R5 426 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 GTSCR1Q86UQ5 136 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 BVESQ8NE79 360 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 OR5AN1Q8NGI8 311 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 C5orf30Q96GV9 206 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 DERL3Q96Q80 235 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 NEURL2Q9BR09 285 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 AGMATQ9BSE5 352 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 SLA2Q9H6Q3 261 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 BABAM2Q9NXR7 383 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 PIPOXQ9P0Z9 390 aa9.04□□□□□ -0.96
HDAC6-219ENST00000476625 SHISA3A0PJX4 238 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 FAM90A7PA6NKC0 464 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 ZNF785A8K8V0 405 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 FAM90A23PA8MXZ1 464 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 H0Y980 276 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 CA11O75493 328 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 IGLV2-23P01705 113 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 CPEP16870 476 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 CAPGP40121 348 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 MECP2P51608 486 aaKnown RBP9.03□□□□□ -0.96
HDAC6-219ENST00000476625 UNC119Q13432 240 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 CD300EQ496F6 205 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-219ENST00000476625 LY6G6FQ5SQ64 297 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 FAM71F2Q6NXP2 309 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 ZNF880Q6PDB4 577 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 C19orf35Q6ZS72 473 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 RPP25LQ8N5L8 163 aaKnown RBP9.03□□□□□ -0.96
HDAC6-219ENST00000476625 ZNF485Q8NCK3 441 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 Q96MT0 163 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 SRD5A3Q9H8P0 318 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 CHMP1AQ9HD42 196 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-219ENST00000476625 CHCHD3Q9NX63 227 aaKnown RBP9.03□□□□□ -0.96
HDAC6-219ENST00000476625 COA4Q9NYJ1 87 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 CKLFQ9UBR5 152 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 PEF1Q9UBV8 284 aaKnown RBP9.03□□□□□ -0.96
HDAC6-219ENST00000476625 STEAP1Q9UHE8 339 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 AK3Q9UIJ7 227 aa9.03□□□□□ -0.96
HDAC6-219ENST00000476625 IGKV1-6A0A0C4DH72 117 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 BMPR1BO00238 502 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 SLC22A1O15245 554 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 CNIH1O95406 144 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 NAPSAO96009 420 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 CRYGBP07316 175 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 SCTP09683 121 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 CD3GP09693 182 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 CEACAM6P40199 344 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 TAGLNQ01995 201 aaKnown RBP9.02□□□□□ -0.97
HDAC6-219ENST00000476625 YIF1BQ5BJH7 314 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 LCN12Q6JVE5 192 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 ZNF343Q6P1L6 599 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 TMPRSS11AQ6ZMR5 421 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 Q8N402 240 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 CACNG8Q8WXS5 425 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 WDR89Q96FK6 387 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-219ENST00000476625 TINAGL1Q9GZM7 467 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-219ENST00000476625 ABRACLQ9P1F3 81 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 DNAH10Q8IVF4 4471 aa9.02□□□□□ -0.97
HDAC6-219ENST00000476625 SRRM4A7MD48 611 aaKnown RBP9.01□□□□□ -0.97
HDAC6-219ENST00000476625 PPP5D1E7EU14 171 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 M0R1X1 148 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 SOCS1O15524 211 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 CIB2O75838 187 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 HLA-AP01891 365 aaKnown RBP9.01□□□□□ -0.97
HDAC6-219ENST00000476625 CD40LGP29965 261 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 HLA-DRB3P79483 266 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 ZNF45Q02386 682 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 RPEL1Q2QD12 228 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 IDO2Q6ZQW0 420 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 ZNF554Q86TJ5 538 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 NEDD4LQ96PU5 975 aa9.01□□□□□ -0.97
HDAC6-219ENST00000476625 MYCBPQ99417 103 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-219ENST00000476625 DIMT1Q9UNQ2 313 aaKnown RBP9.01□□□□□ -0.97
HDAC6-219ENST00000476625 PCLOQ9Y6V0 5065 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms