RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 ASPHD1Q5U4P2 390 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 GPR141Q7Z602 305 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 GON7Q9BXV9 100 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 OR51J1Q9H342 316 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 RIMS4Q9H426 269 aaPredicted RBP10.99□□□□□ -0.65
UPF3A-204ENST00000475218 C12orf4Q9NQ89 552 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 STEAP1Q9UHE8 339 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 V9GY05 133 aa10.99□□□□□ -0.65
UPF3A-204ENST00000475218 FCN1O00602 326 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 RAB29O14966 203 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 SOX15O60248 233 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 EGR2P11161 476 aaPredicted RBP10.98□□□□□ -0.65
UPF3A-204ENST00000475218 VDAC1P21796 283 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 FHL3Q13643 280 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 ZNF367Q7RTV3 350 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 OR5AN1Q8NGI8 311 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 PTX4Q96A99 478 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 GNB4Q9HAV0 340 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 NDUFB11Q9NX14 153 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 PIPOXQ9P0Z9 390 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 A0A0B4J203 849 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 CEACAM6P40199 344 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 LUMP51884 338 aaPredicted RBP10.98□□□□□ -0.65
UPF3A-204ENST00000475218 MINDY2Q8NBR6 621 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 C4orf3Q8WVX3 66 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 FBXL15Q9H469 300 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 PALMDQ9NP74 551 aa10.98□□□□□ -0.65
UPF3A-204ENST00000475218 TRAV1-2A0A0B4J238 106 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 I3L521 148 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 CD3GP09693 182 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 LIN54Q6MZP7 749 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 ZNF491Q8N8L2 437 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 OR8U1Q8NH10 309 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 C5orf30Q96GV9 206 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 CMSS1Q9BQ75 279 aaKnown RBP10.97□□□□□ -0.65
UPF3A-204ENST00000475218 PARP11Q9NR21 331 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 RNF150Q9ULK6 438 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 GAB2Q9UQC2 676 aa10.97□□□□□ -0.65
UPF3A-204ENST00000475218 RAB27BO00194 218 aa10.96□□□□□ -0.65
UPF3A-204ENST00000475218 RRHO14718 337 aa10.96□□□□□ -0.65
UPF3A-204ENST00000475218 ZBTB25P24278 435 aa10.96□□□□□ -0.65
UPF3A-204ENST00000475218 CRIP2P52943 208 aaPredicted RBP10.96□□□□□ -0.65
UPF3A-204ENST00000475218 ZNF383Q8NA42 475 aa10.96□□□□□ -0.65
UPF3A-204ENST00000475218 OR56B1Q8NGI3 324 aa10.96□□□□□ -0.65
UPF3A-204ENST00000475218 MCRIP2Q9BUT9 160 aaKnown RBP10.96□□□□□ -0.65
UPF3A-204ENST00000475218 TOLLIPQ9H0E2 274 aa10.96□□□□□ -0.65
UPF3A-204ENST00000475218 RAB22AQ9UL26 194 aa10.96□□□□□ -0.65
UPF3A-204ENST00000475218 TRAV41A0A0B4J266 112 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 TRDV1A0A1B0GX56 115 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 OR5H14A6NHG9 310 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 IFITM5A6NNB3 132 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 TRDCB7Z8K6 153 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 MFNGO00587 321 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 RAB25P57735 213 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 GNB1P62873 340 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 CX3CL1P78423 397 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 C11orf87Q6NUJ2 197 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 CHCHD6Q9BRQ6 235 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 FCGR3AP08637 254 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 OR5H8P0DN80 308 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 GNB3P16520 340 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 SSBP2P81877 361 aaPredicted RBP10.95□□□□□ -0.66
UPF3A-204ENST00000475218 RUNX1Q01196 453 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 IGSF11Q5DX21 431 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 CASTOR1Q8WTX7 329 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 UBE2E2Q96LR5 201 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 GPR61Q9BZJ8 451 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 TPSG1Q9NRR2 321 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 RDH8Q9NYR8 311 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 ELF5Q9UKW6 265 aaPredicted RBP10.95□□□□□ -0.66
UPF3A-204ENST00000475218 MGAT4AQ9UM21 535 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 WASHC3Q9Y3C0 194 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 NUBP2Q9Y5Y2 271 aa10.95□□□□□ -0.66
UPF3A-204ENST00000475218 IGKV1D-8A0A087WSZ0 117 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 SMIM30A4D0T7 59 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 NOL3O60936 208 aaKnown RBP10.94□□□□□ -0.66
UPF3A-204ENST00000475218 RAB9AP51151 201 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 PSMD7P51665 324 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 GABARAPL2P60520 117 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 PSG5Q15238 335 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 UBE2UQ5VVX9 321 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 C22orf42Q6IC83 251 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 SPARTQ8N0X7 666 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 OR11H1Q8NG94 326 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 OR10R2Q8NGX6 335 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 EDARADDQ8WWZ3 215 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 MAFIPQ8WZ33 124 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 BORCS5Q969J3 196 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 RAB3CQ96E17 227 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 OR5B12Q96R08 314 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 CABLES2Q9BTV7 478 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 ALX4Q9H161 411 aaPredicted RBP10.94□□□□□ -0.66
UPF3A-204ENST00000475218 ZNF230Q9UIE0 474 aaPredicted RBP10.94□□□□□ -0.66
UPF3A-204ENST00000475218 BLOC1S6Q9UL45 172 aa10.94□□□□□ -0.66
UPF3A-204ENST00000475218 HSPA12AO43301 675 aa10.93□□□□□ -0.66
UPF3A-204ENST00000475218 GSTT2P0CG29 244 aa10.93□□□□□ -0.66
UPF3A-204ENST00000475218 GSTT2BP0CG30 244 aa10.93□□□□□ -0.66
UPF3A-204ENST00000475218 HIST1H1DP16402 221 aaKnown RBP10.93□□□□□ -0.66
UPF3A-204ENST00000475218 MC5RP33032 325 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms