RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-205	ENST00000472223	C22orf15	Q8WYQ4	148 aa		13.66	□□□□□ -0.22
CCM2-205	ENST00000472223	ZNF486	Q96H40	463 aa	Predicted RBP	13.66	□□□□□ -0.22
CCM2-205	ENST00000472223	ADTRP	Q96IZ2	230 aa		13.66	□□□□□ -0.22
CCM2-205	ENST00000472223	PALMD	Q9NP74	551 aa		13.66	□□□□□ -0.22
CCM2-205	ENST00000472223	CCL28	Q9NRJ3	127 aa		13.66	□□□□□ -0.22
CCM2-205	ENST00000472223	IGKV1D-13	A0A0B4J2D9	117 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	LY6L	H3BQJ8	138 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	GPR31	O00270	319 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	ZNF735	P0CB33	412 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	IGKV1-13	P0DP09	117 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	REG1B	P48304	166 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	CATR1	Q13166	79 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	ASAH1	Q13510	395 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	RPL39P5	Q59GN2	51 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	C11orf88	Q6PI97	169 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	ZNF833P	Q6ZTB9	187 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	LHFPL1	Q86WI0	220 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	CCDC71L	Q8N9Z2	235 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	HSD17B10	Q99714	261 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	DPAGT1	Q9H3H5	408 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	OCEL1	Q9H607	264 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	SDHAF2	Q9NX18	166 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	F8	P00451	2351 aa		13.65	□□□□□ -0.22
CCM2-205	ENST00000472223	FAM240B	A0A1B0GVZ2	78 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	APOA2	P02652	100 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	MC5R	P33032	325 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	THBS3	P49746	956 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	TAGLN	Q01995	201 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	DCTN2	Q13561	401 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	RBMS2	Q15434	407 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	AADACL3	Q5VUY0	350 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	ODF3L1	Q8IXM7	274 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	DRAM1	Q8N682	238 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	POC5	Q8NA72	575 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	ENKUR	Q8TC29	256 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	MARCH1	Q8TCQ1	289 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	ZNF418	Q8TF45	676 aa	Predicted RBP	13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	ST6GALNAC6	Q969X2	333 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	FXYD6	Q9H0Q3	95 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	MEGF9	Q9H1U4	602 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	COPZ2	Q9P299	210 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	PRELID3B	Q9Y3B1	194 aa		13.64	□□□□□ -0.23
CCM2-205	ENST00000472223	IGHV1-3	A0A0C4DH29	117 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	PLA2G10	O15496	165 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	CRLF1	O75462	422 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	FAM106CP	P0CH98	169 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	GNRHR	P30968	328 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	LRRC75B	Q2VPJ9	315 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	DEFB112	Q30KQ8	113 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	ZNF66	Q6ZN08	573 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	BCL6B	Q8N143	479 aa	Predicted RBP	13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	BVES	Q8NE79	360 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223	RSRP1	Q9BUV0	290 aa		13.63	□□□□□ -0.23
CCM2-205	ENST00000472223		H7C2Y5	167 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	CTSD	P07339	412 aa	Predicted RBP	13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	FAM157C	P0CG43	387 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	RRAS	P10301	218 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	RAB13	P51153	203 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	BAMBI	Q13145	260 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	AANAT	Q16613	207 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	RTL8B	Q17RB0	113 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	ZNF818P	Q6ZRF7	136 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	ZDHHC22	Q8N966	263 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	OR13C8	Q8NGS7	320 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	CAPSL	Q8WWF8	208 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	JMJD8	Q96S16	334 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	SSX3	Q99909	188 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	NAV3	Q8IVL0	2385 aa		13.62	□□□□□ -0.23
CCM2-205	ENST00000472223	TIMM23	O14925	209 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	TNFSF12	O43508	249 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	RLN1	P04808	185 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	KIR2DS2	P43631	304 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	CCR6	P51684	374 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	DIAPH2-AS1	Q14236	149 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	HES1	Q14469	280 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	PHLDA2	Q53GA4	152 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	KCTD9	Q7L273	389 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	OR5R1	Q8NH85	324 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	C17orf50	Q8WW18	174 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	TCTEX1D2	Q8WW35	142 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	ZNF251	Q9BRH9	671 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	MRPL20	Q9BYC9	149 aa	Known RBP	13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	PITPNC1	Q9UKF7	332 aa		13.61	□□□□□ -0.23
CCM2-205	ENST00000472223	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	VGLL3	A8MV65	326 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	NDUFB6	O95139	128 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	CT45A6	P0DMU7	189 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	CT45A5	P0DMU8	189 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	CT45A7	P0DMV0	189 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	CD1B	P29016	333 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	DUT	P33316	252 aa	Known RBP	13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	DYNLT3	P51808	116 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	PIGP	P57054	158 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	TAS2R31	P59538	309 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	LDLRAD2	Q5SZI1	272 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223		Q6YL49	198 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	TMED4	Q7Z7H5	227 aa		13.6	□□□□□ -0.23
CCM2-205	ENST00000472223	SIGLECL1	Q8N7X8	197 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms