RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 UBE2UQ5VVX9 321 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 LIN54Q6MZP7 749 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 NR2C2APQ86WQ0 139 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 MINDY2Q8NBR6 621 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 CABLES2Q9BTV7 478 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 KLK15Q9H2R5 256 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 PARP11Q9NR21 331 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 KIAA1456Q9P272 454 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 FBXO7Q9Y3I1 522 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 WSB1Q9Y6I7 421 aa8.98□□□□□ -0.97
COL4A3-205ENST00000471862 TRAV41A0A0B4J266 112 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 TRDCB7Z8K6 153 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 I3L521 148 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 RAB27BO00194 218 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 HSPA12AO43301 675 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 RBBP9O75884 186 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 FCGR3AP08637 254 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 EGR2P11161 476 aaPredicted RBP8.97□□□□□ -0.97
COL4A3-205ENST00000471862 RAB3BP20337 219 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 RAB6AP20340 208 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 CX3CL1P78423 397 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 RUNX1Q01196 453 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 ZNF660Q6AZW8 331 aaPredicted RBP8.97□□□□□ -0.97
COL4A3-205ENST00000471862 ZNF491Q8N8L2 437 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 OR4A4PQ8NGN8 299 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 DPF1Q92782 380 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 RAB3CQ96E17 227 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 UBE2E2Q96LR5 201 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 RNF5Q99942 180 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 FBXL15Q9H469 300 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 GNB4Q9HAV0 340 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 RDH8Q9NYR8 311 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 WASHC3Q9Y3C0 194 aa8.97□□□□□ -0.97
COL4A3-205ENST00000471862 FCN1O00602 326 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 FABP7O15540 132 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 SOX15O60248 233 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 DIRAS3O95661 229 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 SNRPBP14678 240 aaKnown RBP8.96□□□□□ -0.98
COL4A3-205ENST00000471862 HIST1H1DP16402 221 aaKnown RBP8.96□□□□□ -0.98
COL4A3-205ENST00000471862 MYL9P24844 172 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 SERPINB10P48595 397 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 LINC00205P59089 165 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 ASPHD1Q5U4P2 390 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 C22orf42Q6IC83 251 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 SPARTQ8N0X7 666 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 ZNF383Q8NA42 475 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 OR5M8Q8NGP6 311 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 OR10R2Q8NGX6 335 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 RNF150Q9ULK6 438 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 GAB2Q9UQC2 676 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 VSIG4Q9Y279 399 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 NUBP2Q9Y5Y2 271 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 COL7A1Q02388 2944 aa8.96□□□□□ -0.98
COL4A3-205ENST00000471862 TRBV6-7A0A0A0MS04 114 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 A0A0B4J203 849 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 SPDEFO95238 335 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 IGKV1-16P04430 117 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 TFAP2AP05549 437 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 GSTP1P09211 210 aaKnown RBP8.95□□□□□ -0.98
COL4A3-205ENST00000471862 CD3GP09693 182 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 GSTT2P0CG29 244 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 GSTT2BP0CG30 244 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 GNB3P16520 340 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 FGF9P31371 208 aaPredicted RBP8.95□□□□□ -0.98
COL4A3-205ENST00000471862 RAB9AP51151 201 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 RAB25P57735 213 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 PSG5Q15238 335 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 IGSF11Q5DX21 431 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 C9orf66Q5T8R8 295 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 Q6ZS49 121 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 TCTEX1D1Q8N7M0 179 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 DRAXINQ8NBI3 349 aaPredicted RBP8.95□□□□□ -0.98
COL4A3-205ENST00000471862 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.95□□□□□ -0.98
COL4A3-205ENST00000471862 OR11H1Q8NG94 326 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 C5orf30Q96GV9 206 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 ZNF221Q9UK13 617 aa8.95□□□□□ -0.98
COL4A3-205ENST00000471862 A0A1W2PN81 502 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 H7C2Y5 167 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 GADD45AP24522 165 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 CHRNA7P36544 502 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 LUMP51884 338 aaPredicted RBP8.94□□□□□ -0.98
COL4A3-205ENST00000471862 GNB1P62873 340 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 DGCR2P98153 550 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 SRSF7Q16629 238 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL4A3-205ENST00000471862 ECSCRQ19T08 205 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 TMEM65Q6PI78 240 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 ZNF562Q6V9R5 426 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 FCGR1BQ92637 280 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 YTHDF1Q9BYJ9 559 aaKnown RBP8.94□□□□□ -0.98
COL4A3-205ENST00000471862 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL4A3-205ENST00000471862 TPSG1Q9NRR2 321 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 TXNL4BQ9NX01 149 aaKnown RBP8.94□□□□□ -0.98
COL4A3-205ENST00000471862 ZMAT5Q9UDW3 170 aaKnown RBP8.94□□□□□ -0.98
COL4A3-205ENST00000471862 SCOCQ9UIL1 159 aa8.94□□□□□ -0.98
COL4A3-205ENST00000471862 ELF5Q9UKW6 265 aaPredicted RBP8.94□□□□□ -0.98
COL4A3-205ENST00000471862 FOXA2Q9Y261 457 aaPredicted RBP8.94□□□□□ -0.98
COL4A3-205ENST00000471862 IGKV1D-8A0A087WSZ0 117 aa8.93□□□□□ -0.98
COL4A3-205ENST00000471862 SMIM30A4D0T7 59 aa8.93□□□□□ -0.98
COL4A3-205ENST00000471862 NOTOA8MTQ0 251 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms