RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ACSM3Q53FZ2 586 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 OR8G2PQ6IF36 304 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 UNQ9370/PRO34162Q6UXP9 181 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 Q6ZSR3 168 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 H2BFWTQ7Z2G1 175 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 NAA40Q86UY6 237 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 TPRA1Q86W33 373 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 MTURNQ8N3F0 131 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 ZFP41Q8N8Y5 198 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 SLC30A7Q8NEW0 376 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 OR1L4Q8NGR5 311 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 SLC7A6Q92536 515 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 TMEM203Q969S6 136 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 APOBEC3DQ96AK3 386 aaPredicted RBP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 SGK3Q96BR1 496 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 S100PBPQ96BU1 408 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 C10orf35Q96D05 121 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 VSIG2Q96IQ7 327 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 PGLYRP3Q96LB9 341 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 C9orf85Q96MD7 179 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 KIR2DL4Q99706 377 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 PDCD1LG2Q9BQ51 273 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 TMED9Q9BVK6 235 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 ACTR6Q9GZN1 396 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 OR51E2Q9H255 320 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 RGCCQ9H4X1 137 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 NOX3Q9HBY0 568 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 RAB18Q9NP72 206 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 PLSCR3Q9NRY6 295 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 TXNL4BQ9NX01 149 aaKnown RBP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 MBD2Q9UBB5 411 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 RSL24D1Q9UHA3 163 aaKnown RBP3.66□□□□□ -1.82
CCDC39-202ENST00000471307 ENPP5Q9UJA9 477 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 HHLA2Q9UM44 414 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 SLC22A13Q9Y226 551 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 RNF115Q9Y4L5 304 aa3.66□□□□□ -1.82
CCDC39-202ENST00000471307 FLNCQ14315 2725 aa3.65□□□□□ -1.82
CCDC39-202ENST00000471307 TRAV1-2A0A0B4J238 106 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 IGHV1-18A0A0C4DH31 117 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 LOC100506127A0A0U1RQW1 187 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 A0A1B0GTI1 187 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 PNMA8CA0A1B0GUJ8 204 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 A0A1B0GVI7 797 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 DHRS7CA6NNS2 312 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF879B4DU55 563 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 GABRPO00591 440 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 ABCD4O14678 606 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 PPIHO43447 177 aaKnown RBP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 GPX5O75715 221 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 ARL6IP5O75915 188 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 IGLV3-1P01715 115 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 UCHL1P09936 223 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 CECR9P0C854 216 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 OCM2P0CE71 109 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 SLC2A1P11166 492 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 CCL1P22362 96 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 CCNOP22674 350 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 PTBP1P26599 531 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 DDOSTP39656 456 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 UQCRFS1P47985 274 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 IDH3GP51553 393 aaPredicted RBP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 PSMD7P51665 324 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 EFNB2P52799 333 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 RPS11P62280 158 aaKnown RBP eCLIP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 FABP5Q01469 135 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 TFF3Q07654 80 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 ASAH1Q13510 395 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 Q499Y3 187 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 TMEM91Q6ZNR0 172 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 RDH10Q8IZV5 341 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 OR8B12Q8NGG6 310 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 OR5D14Q8NGL3 314 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 OR51E1Q8TCB6 317 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 ITLN2Q8WWU7 325 aaPredicted RBP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 C12orf43Q96C57 262 aaKnown RBP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 ISOC1Q96CN7 298 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 KCTD7Q96MP8 289 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 WFIKKN1Q96NZ8 548 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 SLC6A7Q99884 636 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 KCNS3Q9BQ31 491 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 MED18Q9BUE0 208 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 C1QTNF6Q9BXI9 259 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 BCL2L14Q9BZR8 327 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 EXOSC4Q9NPD3 245 aaKnown RBP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 GPR84Q9NQS5 396 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 DPM3Q9P2X0 92 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 STARD10Q9Y365 291 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 N6AMT1Q9Y5N5 214 aa3.65□□□□□ -1.83
CCDC39-202ENST00000471307 SPTAN1Q13813 2472 aaKnown RBP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 ANKHD1Q8IWZ3 2542 aaKnown RBP3.65□□□□□ -1.83
CCDC39-202ENST00000471307 ADGRG4Q8IZF6 3080 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 ICE1Q9Y2F5 2266 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 PLCE1Q9P212 2302 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 IGHV2OR16-5A0A0B4J2B6 119 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 TRBV7-9A0A0J9YWB2 115 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 LOC107986453A0A1B0GWG9 222 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 NKX2-6A6NCS4 301 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 H3BMQ9 156 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 M0R1B8 84 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 NDUFS8O00217 210 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms