RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 COL8A2P25067 703 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 FCGR2CP31995 323 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 PPOXP50336 477 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 UTF1Q5T230 341 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 TMED4Q7Z7H5 227 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 COMMD1Q8N668 190 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 OR13A1Q8NGR1 328 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 EGLN1Q9GZT9 426 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 PARP12Q9H0J9 701 aaKnown RBP6.86□□□□□ -1.31
BRCA1-208ENST00000468300 KIF25Q9UIL4 384 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 ROS1P08922 2347 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF462Q96JM2 2506 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 C9orf170A2RU37 121 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 OOEPA6NGQ2 149 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 SOX15O60248 233 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 RP2O75695 350 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 GYPAP02724 150 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 TK1P04183 234 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 NPSP0C0P6 89 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 H2BFSP57053 126 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 SURF2Q15527 256 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-208ENST00000468300 LY6G6FQ5SQ64 297 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF546Q86UE3 836 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 H1FOOQ8IZA3 346 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-208ENST00000468300 OR4A4PQ8NGN8 299 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF431Q8TF32 576 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-208ENST00000468300 IGFBPL1Q8WX77 278 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 KIRREL1Q96J84 757 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 TMEM106BQ9NUM4 274 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 KCNIP3Q9Y2W7 256 aa6.86□□□□□ -1.31
BRCA1-208ENST00000468300 MEIKINA0A087WXM9 373 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 C12orf77C9JDV5 145 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 MUC1P15941 1255 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-208ENST00000468300 GNRHRP30968 328 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 MRPS11P82912 194 aaKnown RBP6.85□□□□□ -1.31
BRCA1-208ENST00000468300 NHLH2Q02577 135 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 TCTE3Q8IZS6 198 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 UBALD1Q8TB05 177 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 SNX22Q96L94 193 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 ALKBH7Q9BT30 221 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-208ENST00000468300 RSRP1Q9BUV0 290 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 ONECUT1Q9UBC0 465 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 SVEP1Q4LDE5 3571 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 CLEC18AA5D8T8 446 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 A6NNC1 897 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 LYNX1G3V0Z9 82 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 PPYP01298 95 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 LYNX1P0DP58 116 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 UCP3P55916 312 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 Q5BKY6 102 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 DCAF12L2Q5VW00 463 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 LYPD2Q6UXB3 125 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 CLEC18BQ6UXF7 455 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 LYG2Q86SG7 212 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 COMMD7Q86VX2 200 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 SPICQ8N5J4 248 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 FAM216BQ8N7L0 139 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 CLEC18CQ8NCF0 446 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 OR11L1Q8NGX0 322 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 OR1L1Q8NH94 360 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 CCL13Q99616 98 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 MAGT1Q9H0U3 335 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 CBLN4Q9NTU7 201 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 PRR13Q9NZ81 148 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 GLS2Q9UI32 602 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 TACC2O95359 2948 aa6.85□□□□□ -1.31
BRCA1-208ENST00000468300 PKDREJQ9NTG1 2253 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 IGHV1-69-2A0A0G2JMI3 117 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 KIR2DS1A0A191URI9 304 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 TMEM30CPA0ZSE6 113 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 M0QZK8 103 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 LY6HO94772 140 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 SCGB1D1O95968 90 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 RLN2P04090 185 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 KIR2DS4P43632 304 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 KIR2DS1Q14954 304 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 RNF212Q495C1 297 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 RNF152Q8N8N0 203 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF383Q8NA42 475 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 ASCL2Q99929 193 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 CSTL1Q9H114 145 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 MED28Q9H204 178 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 TAF9BQ9HBM6 251 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 CTSZQ9UBR2 303 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 TRAPPC2LQ9UL33 140 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 KIAA2026Q5HYC2 2103 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 DOPEY1Q5JWR5 2465 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 SIGLEC5O15389 551 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 CREBL2O60519 120 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-208ENST00000468300 ATG12O94817 140 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 OR2A4O95047 310 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 IFNA21P01568 189 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-208ENST00000468300 AKR1C4P17516 323 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 SSTR5P35346 364 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 GABRA2P47869 451 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 ANKRD55Q3KP44 614 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 TMEM128Q5BJH2 165 aa6.84□□□□□ -1.31
BRCA1-208ENST00000468300 RBMS3Q6XE24 437 aaKnown RBP6.84□□□□□ -1.31
BRCA1-208ENST00000468300 ZNF767PQ75MW2 155 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms