RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 VDAC1P21796 283 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 SERPINB10P48595 397 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 FOXB2Q5VYV0 432 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 GLDNQ6ZMI3 551 aaPredicted RBP13.4□□□□□ -0.26
SSBP1-207ENST00000468267 LCNL1Q6ZST4 164 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 C8orf86Q6ZUL3 223 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 OR5AN1Q8NGI8 311 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 KCTD7Q96MP8 289 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 ATG5Q9H1Y0 275 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 OR51E2Q9H255 320 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 OR51J1Q9H342 316 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 RDH8Q9NYR8 311 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 KIAA1456Q9P272 454 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
SSBP1-207ENST00000468267 RBBP9O75884 186 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 GSTT2P0CG29 244 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 GSTT2BP0CG30 244 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 OR5H8P0DN80 308 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 MYCNOSP40205 109 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 KIR2DS1Q14954 304 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 IGSF11Q5DX21 431 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 LIN54Q6MZP7 749 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 CABLES2Q9BTV7 478 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 RRP15Q9Y3B9 282 aaKnown RBP13.39□□□□□ -0.27
SSBP1-207ENST00000468267 WASHC3Q9Y3C0 194 aa13.39□□□□□ -0.27
SSBP1-207ENST00000468267 TRBV6-7A0A0A0MS04 114 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 IGHV7-81A0A0B4J1V7 117 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 H7C2Y5 167 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 BET1O15155 118 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 DUS4LO95620 317 aaKnown RBP13.38□□□□□ -0.27
SSBP1-207ENST00000468267 DIRAS3O95661 229 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 PSMB8P28062 276 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 CDX1P47902 265 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-207ENST00000468267 ARL6IP1Q15041 203 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSBP1-207ENST00000468267 KCTD21Q4G0X4 260 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 DRAXINQ8NBI3 349 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-207ENST00000468267 OR10J5Q8NHC4 309 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 MAFIPQ8WZ33 124 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 P2RX4Q99571 388 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 RNF5Q99942 180 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSBP1-207ENST00000468267 ZNF230Q9UIE0 474 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-207ENST00000468267 WSB1Q9Y6I7 421 aa13.38□□□□□ -0.27
SSBP1-207ENST00000468267 G3V318 75 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 RRHO14718 337 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 ATP6V0E1O15342 81 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 GSTP1P09211 210 aaKnown RBP13.37□□□□□ -0.27
SSBP1-207ENST00000468267 PPIFP30405 207 aaKnown RBP13.37□□□□□ -0.27
SSBP1-207ENST00000468267 SDC2P34741 201 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 TALDO1P37837 337 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 ARFRP1Q13795 201 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 CDNFQ49AH0 187 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 Q6ZS49 121 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 ZNF383Q8NA42 475 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-207ENST00000468267 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 FBXL15Q9H469 300 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 PARP11Q9NR21 331 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 AURKAIP1Q9NWT8 199 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-207ENST00000468267 DAPK2Q9UIK4 370 aa13.37□□□□□ -0.27
SSBP1-207ENST00000468267 ELF5Q9UKW6 265 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-207ENST00000468267 CCL24O00175 119 aa13.36□□□□□ -0.27
SSBP1-207ENST00000468267 TFAP2AP05549 437 aa13.36□□□□□ -0.27
SSBP1-207ENST00000468267 LINC00205P59089 165 aa13.36□□□□□ -0.27
SSBP1-207ENST00000468267 NEDD8Q15843 81 aa13.36□□□□□ -0.27
SSBP1-207ENST00000468267 ZNF660Q6AZW8 331 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-207ENST00000468267 SFXN4Q6P4A7 337 aa13.36□□□□□ -0.27
SSBP1-207ENST00000468267 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
SSBP1-207ENST00000468267 GAB2Q9UQC2 676 aa13.36□□□□□ -0.27
SSBP1-207ENST00000468267 TRAV41A0A0B4J266 112 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 LOC100506127A0A0U1RQW1 187 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 M0R1X1 148 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 FCN1O00602 326 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 IGLV1-40P01703 118 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 OR8U9P0C7N5 309 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 SNRPBP14678 240 aaKnown RBP13.35□□□□□ -0.27
SSBP1-207ENST00000468267 CD36P16671 472 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 DTYMKP23919 212 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 CX3CL1P78423 397 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 PSG5Q15238 335 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 HACD4Q5VWC8 232 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 MINDY2Q8NBR6 621 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 OR8U1Q8NH10 309 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 MYOZ3Q8TDC0 251 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 DUX3Q96PT4 197 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 GPR61Q9BZJ8 451 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 RNF167Q9H6Y7 350 aa13.35□□□□□ -0.27
SSBP1-207ENST00000468267 TNCP24821 2201 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 IGKV1D-8A0A087WSZ0 117 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 SCGNO76038 276 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 APOA2P02652 100 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 IGKV1-16P04430 117 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 CRIP2P52943 208 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-207ENST00000468267 NDPQ00604 133 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 MXD1Q05195 221 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 KIAA0141Q14154 515 aaPredicted RBP13.34□□□□□ -0.27
SSBP1-207ENST00000468267 PLGLAQ15195 96 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 DEFB136Q30KP8 78 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms