RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 TMEM267Q0VDI3 215 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-206ENST00000466532 OR5AN1Q8NGI8 311 aa14.82□□□□□ -0.04
COL9A3-206ENST00000466532 C11orf54Q9H0W9 315 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-206ENST00000466532 NUBP2Q9Y5Y2 271 aa14.82□□□□□ -0.04
COL9A3-206ENST00000466532 HUWE1Q7Z6Z7 4374 aaKnown RBP14.82□□□□□ -0.04
COL9A3-206ENST00000466532 LGALS1P09382 135 aaKnown RBP14.81□□□□□ -0.04
COL9A3-206ENST00000466532 EGR2P11161 476 aaPredicted RBP14.81□□□□□ -0.04
COL9A3-206ENST00000466532 ACTBL2Q562R1 376 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 PYHIN1Q6K0P9 492 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 CD200R1LQ6Q8B3 271 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 PPP1R27Q86WC6 154 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 FAM89BQ8N5H3 189 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 CLCC1Q96S66 551 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 GFI1Q99684 422 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 RNF5Q99942 180 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 FAM103A1Q9BTL3 118 aaKnown RBP14.81□□□□□ -0.04
COL9A3-206ENST00000466532 METTL1Q9UBP6 276 aaKnown RBP14.81□□□□□ -0.04
COL9A3-206ENST00000466532 RNF150Q9ULK6 438 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 HSF4Q9ULV5 492 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 MGAT4AQ9UM21 535 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 GAB2Q9UQC2 676 aa14.81□□□□□ -0.04
COL9A3-206ENST00000466532 AK6Q9Y3D8 172 aaKnown RBP14.81□□□□□ -0.04
COL9A3-206ENST00000466532 IGHV4OR15-8A0A075B7B6 117 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 A0A087WW49 117 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 SLC17A2O00624 439 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 SCTP09683 121 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 IRF3Q14653 427 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 UNQ5815/PRO19632Q6UWF5 114 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 DRAXINQ8NBI3 349 aaPredicted RBP14.8□□□□□ -0.04
COL9A3-206ENST00000466532 Q9N2K0 584 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 C12orf4Q9NQ89 552 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 TPSG1Q9NRR2 321 aa14.8□□□□□ -0.04
COL9A3-206ENST00000466532 FOXI3A8MTJ6 420 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-206ENST00000466532 CA2P00918 260 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 IGHV3-11P01762 117 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 HSMCR30P0CW71 290 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 CPEP16870 476 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 VEGFCP49767 419 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 RPS25P62851 125 aaKnown RBP14.79□□□□□ -0.04
COL9A3-206ENST00000466532 PSG5Q15238 335 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 RAB11BQ15907 218 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 AKIRIN2Q53H80 203 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 TMEM91Q6ZNR0 172 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 LFNGQ8NES3 379 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 ARHGAP5-AS1Q96IT6 56 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 MS4A10Q96PG2 267 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 ZNF221Q9UK13 617 aa14.79□□□□□ -0.04
COL9A3-206ENST00000466532 STAB2Q8WWQ8 2551 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 PROP1O75360 226 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 ARL6IP5O75915 188 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 SNRPBP14678 240 aaKnown RBP14.78□□□□□ -0.04
COL9A3-206ENST00000466532 SPNP16150 400 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 CD40LGP29965 261 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 TMEM50BP56557 158 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 CLDN12P56749 244 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 TPPP2P59282 170 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 TPBGQ13641 420 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 TRAM1Q15629 374 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 ACSM6Q6P461 480 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 ZNF562Q6V9R5 426 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 ARPC1AQ92747 370 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 PTX4Q96A99 478 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 TSNAXQ99598 290 aaKnown RBP14.78□□□□□ -0.04
COL9A3-206ENST00000466532 CMSS1Q9BQ75 279 aaKnown RBP14.78□□□□□ -0.04
COL9A3-206ENST00000466532 PECRQ9BY49 303 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 TPRKBQ9Y3C4 175 aa14.78□□□□□ -0.04
COL9A3-206ENST00000466532 SPDEFO95238 335 aa14.77□□□□□ -0.05
COL9A3-206ENST00000466532 IGKV1-16P04430 117 aa14.77□□□□□ -0.05
COL9A3-206ENST00000466532 LINC00205P59089 165 aa14.77□□□□□ -0.05
COL9A3-206ENST00000466532 RPS16P62249 146 aaKnown RBP14.77□□□□□ -0.05
COL9A3-206ENST00000466532 PITPNAQ00169 270 aa14.77□□□□□ -0.05
COL9A3-206ENST00000466532 PDPNQ86YL7 162 aa14.77□□□□□ -0.05
COL9A3-206ENST00000466532 ZNF383Q8NA42 475 aa14.77□□□□□ -0.05
COL9A3-206ENST00000466532 OR6Q1Q8NGQ2 317 aa14.77□□□□□ -0.05
COL9A3-206ENST00000466532 FLYWCH2Q96CP2 140 aaKnown RBP14.77□□□□□ -0.05
COL9A3-206ENST00000466532 SLA2Q9H6Q3 261 aa14.77□□□□□ -0.05
COL9A3-206ENST00000466532 IGKV1-6A0A0C4DH72 117 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 RGS10O43665 173 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 APOA2P02652 100 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 HSPB1P04792 205 aaKnown RBP14.76□□□□□ -0.05
COL9A3-206ENST00000466532 TFAP2AP05549 437 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 OR8U9P0C7N5 309 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 GP9P14770 177 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 PSMA1P25786 263 aaKnown RBP14.76□□□□□ -0.05
COL9A3-206ENST00000466532 CALRP27797 417 aaKnown RBP14.76□□□□□ -0.05
COL9A3-206ENST00000466532 AQP4P55087 323 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 OVCH2Q7RTZ1 564 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 SBSPONQ8IVN8 264 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 OR56B1Q8NGI3 324 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 FAM3DQ96BQ1 224 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 RDH8Q9NYR8 311 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 NKX1-2Q9UD57 310 aaPredicted RBP14.76□□□□□ -0.05
COL9A3-206ENST00000466532 DNAH7Q8WXX0 4024 aa14.76□□□□□ -0.05
COL9A3-206ENST00000466532 TRDCB7Z8K6 153 aa14.75□□□□□ -0.05
COL9A3-206ENST00000466532 ANKRD65E5RJM6 399 aa14.75□□□□□ -0.05
COL9A3-206ENST00000466532 C3orf84H3BNL1 204 aa14.75□□□□□ -0.05
COL9A3-206ENST00000466532 SLC25A17O43808 307 aa14.75□□□□□ -0.05
COL9A3-206ENST00000466532 TRGV3P03979 118 aa14.75□□□□□ -0.05
COL9A3-206ENST00000466532 MLLT11Q13015 90 aaPredicted RBP14.75□□□□□ -0.05
COL9A3-206ENST00000466532 C2orf76Q3KRA6 126 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms