RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 HLA-DRB3P79483 266 aa16.13■□□□□ 0.17
CSPG5-204ENST00000465441 TMEM267Q0VDI3 215 aaPredicted RBP16.13■□□□□ 0.17
CSPG5-204ENST00000465441 CD200R1LQ6Q8B3 271 aa16.13■□□□□ 0.17
CSPG5-204ENST00000465441 UFD1Q92890 307 aa16.13■□□□□ 0.17
CSPG5-204ENST00000465441 RNF5Q99942 180 aa16.13■□□□□ 0.17
CSPG5-204ENST00000465441 VCXQ9H320 206 aa16.13■□□□□ 0.17
CSPG5-204ENST00000465441 Q9N2K0 584 aa16.13■□□□□ 0.17
CSPG5-204ENST00000465441 GAB2Q9UQC2 676 aa16.13■□□□□ 0.17
CSPG5-204ENST00000465441 WASHC3Q9Y3C0 194 aa16.13■□□□□ 0.17
CSPG5-204ENST00000465441 FOXI3A8MTJ6 420 aaPredicted RBP16.12■□□□□ 0.17
CSPG5-204ENST00000465441 LINC01619G3V211 115 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 SLC17A2O00624 439 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 HSPA12AO43301 675 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 RBBP9O75884 186 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 LINC00205P59089 165 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 PPP1R27Q86WC6 154 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 TCTEX1D1Q8N7M0 179 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 DRAXINQ8NBI3 349 aaPredicted RBP16.12■□□□□ 0.17
CSPG5-204ENST00000465441 ABHD5Q8WTS1 349 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 EDARADDQ8WWZ3 215 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 FAM103A1Q9BTL3 118 aaKnown RBP16.12■□□□□ 0.17
CSPG5-204ENST00000465441 PLGRKTQ9HBL7 147 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 HSF4Q9ULV5 492 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 SMAD5-AS1Q9Y6J3 95 aa16.12■□□□□ 0.17
CSPG5-204ENST00000465441 HUWE1Q7Z6Z7 4374 aaKnown RBP16.12■□□□□ 0.17
CSPG5-204ENST00000465441 NBEAL2Q6ZNJ1 2754 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 IGHV4OR15-8A0A075B7B6 117 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 A0A087WW49 117 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 VEGFCP49767 419 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 TPBGQ13641 420 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 PSG5Q15238 335 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 AKIRIN2Q53H80 203 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 UNQ5815/PRO19632Q6UWF5 114 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 ZNF562Q6V9R5 426 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 PTX4Q96A99 478 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 ARHGAP5-AS1Q96IT6 56 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 MS4A10Q96PG2 267 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 ISYNA1Q9NPH2 558 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 METTL1Q9UBP6 276 aaKnown RBP16.11■□□□□ 0.17
CSPG5-204ENST00000465441 MGAT4AQ9UM21 535 aa16.11■□□□□ 0.17
CSPG5-204ENST00000465441 SORL1Q92673 2214 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 SAP30O75446 220 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 LGALS1P09382 135 aaKnown RBP16.1■□□□□ 0.17
CSPG5-204ENST00000465441 HSMCR30P0CW71 290 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 RPS25P62851 125 aaKnown RBP16.1■□□□□ 0.17
CSPG5-204ENST00000465441 C2orf76Q3KRA6 126 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 ACTBL2Q562R1 376 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 LFNGQ8NES3 379 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 PECRQ9BY49 303 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 DUSP21Q9H596 190 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 NKX1-2Q9UD57 310 aaPredicted RBP16.1■□□□□ 0.17
CSPG5-204ENST00000465441 TPRKBQ9Y3C4 175 aa16.1■□□□□ 0.17
CSPG5-204ENST00000465441 IGKV1-6A0A0C4DH72 117 aa16.09■□□□□ 0.17
CSPG5-204ENST00000465441 IGHV3-11P01762 117 aa16.09■□□□□ 0.17
CSPG5-204ENST00000465441 SPNP16150 400 aa16.09■□□□□ 0.17
CSPG5-204ENST00000465441 CLDN12P56749 244 aa16.09■□□□□ 0.17
CSPG5-204ENST00000465441 RPS16P62249 146 aaKnown RBP16.09■□□□□ 0.17
CSPG5-204ENST00000465441 ZNF383Q8NA42 475 aa16.09■□□□□ 0.17
CSPG5-204ENST00000465441 RHOVQ96L33 236 aa16.09■□□□□ 0.17
CSPG5-204ENST00000465441 CMSS1Q9BQ75 279 aaKnown RBP16.09■□□□□ 0.17
CSPG5-204ENST00000465441 CA2P00918 260 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 IGKV1-16P04430 117 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 HSPB1P04792 205 aaKnown RBP16.08■□□□□ 0.16
CSPG5-204ENST00000465441 CPEP16870 476 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 TRAM1Q15629 374 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 RAB11BQ15907 218 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 PLAC9Q5JTB6 97 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 PYHIN1Q6K0P9 492 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 ACSM6Q6P461 480 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 SBSPONQ8IVN8 264 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 ZNF221Q9UK13 617 aa16.08■□□□□ 0.16
CSPG5-204ENST00000465441 ERICH4A6NGS2 130 aa16.07■□□□□ 0.16
CSPG5-204ENST00000465441 ARL6IP5O75915 188 aa16.07■□□□□ 0.16
CSPG5-204ENST00000465441 AQP4P55087 323 aa16.07■□□□□ 0.16
CSPG5-204ENST00000465441 ARPC1AQ92747 370 aa16.07■□□□□ 0.16
CSPG5-204ENST00000465441 FAM3DQ96BQ1 224 aa16.07■□□□□ 0.16
CSPG5-204ENST00000465441 FLYWCH2Q96CP2 140 aaKnown RBP16.07■□□□□ 0.16
CSPG5-204ENST00000465441 TSNAXQ99598 290 aaKnown RBP16.07■□□□□ 0.16
CSPG5-204ENST00000465441 C12orf4Q9NQ89 552 aa16.07■□□□□ 0.16
CSPG5-204ENST00000465441 RDH8Q9NYR8 311 aa16.07■□□□□ 0.16
CSPG5-204ENST00000465441 TRDCB7Z8K6 153 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 TFAP2AP05549 437 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 GP9P14770 177 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 CALRP27797 417 aaKnown RBP16.06■□□□□ 0.16
CSPG5-204ENST00000465441 CD40LGP29965 261 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 TPPP2P59282 170 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 FABP5Q01469 135 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 PLA2G7Q13093 441 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 OVCH2Q7RTZ1 564 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 OR56B1Q8NGI3 324 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 NRG4Q8WWG1 115 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 CCDC90BQ9GZT6 254 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 SLA2Q9H6Q3 261 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 TENM3Q9P273 2699 aa16.06■□□□□ 0.16
CSPG5-204ENST00000465441 ARPC1BO15143 372 aaKnown RBP16.05■□□□□ 0.16
CSPG5-204ENST00000465441 LDLRAD4O15165 306 aa16.05■□□□□ 0.16
CSPG5-204ENST00000465441 DENRO43583 198 aaKnown RBP16.05■□□□□ 0.16
CSPG5-204ENST00000465441 RGS10O43665 173 aa16.05■□□□□ 0.16
CSPG5-204ENST00000465441 SPDEFO95238 335 aa16.05■□□□□ 0.16
CSPG5-204ENST00000465441 PSMA1P25786 263 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms