RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 TMEM219Q86XT9 240 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 SNAPC3Q92966 411 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 EAF1Q96JC9 268 aaPredicted RBP10.95□□□□□ -0.66
LIMD1-203ENST00000465039 ZNF747Q9BV97 191 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 MRPL20Q9BYC9 149 aaKnown RBP10.95□□□□□ -0.66
LIMD1-203ENST00000465039 MMP27Q9H306 513 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 ANK2Q01484 3957 aa10.95□□□□□ -0.66
LIMD1-203ENST00000465039 CTDSPLO15194 276 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 OR8U9P0C7N5 309 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 OR5H8P0DN80 308 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 OR3A3P47888 321 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 LUMP51884 338 aaPredicted RBP10.94□□□□□ -0.66
LIMD1-203ENST00000465039 PROK1P58294 105 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 HES1Q14469 280 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 CDK10Q15131 360 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 PYHIN1Q6K0P9 492 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 SHISA2Q6UWI4 295 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 OVCH2Q7RTZ1 564 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 PDPNQ86YL7 162 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 LAX1Q8IWV1 398 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 OR8U1Q8NH10 309 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 MCFD2Q8NI22 146 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 GIMAP1Q8WWP7 306 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 WFDC12Q8WWY7 111 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 DGCR14Q96DF8 476 aaKnown RBP10.94□□□□□ -0.66
LIMD1-203ENST00000465039 ABHD14BQ96IU4 210 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 OR2D2Q9H210 308 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 MIXL1Q9H2W2 232 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 ZNF702PQ9H963 129 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 LIN7CQ9NUP9 197 aaKnown RBP10.94□□□□□ -0.66
LIMD1-203ENST00000465039 ZNF580Q9UK33 172 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 MRPS7Q9Y2R9 242 aaKnown RBP10.94□□□□□ -0.66
LIMD1-203ENST00000465039 WASHC3Q9Y3C0 194 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 RNF114Q9Y508 228 aa10.94□□□□□ -0.66
LIMD1-203ENST00000465039 SPDEFO95238 335 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 APOA2P02652 100 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 CT45A6P0DMU7 189 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 CT45A5P0DMU8 189 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 CT45A7P0DMV0 189 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 RRASP10301 218 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 MDKP21741 143 aaPredicted RBP10.93□□□□□ -0.66
LIMD1-203ENST00000465039 DYRK1AQ13627 763 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 ZNF645Q8N7E2 425 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 GVQW1Q8N7I0 195 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 C5orf56Q8N8D9 126 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 ZBTB34Q8NCN2 500 aa10.93□□□□□ -0.66
LIMD1-203ENST00000465039 C6orf62Q9GZU0 229 aaPredicted RBP10.93□□□□□ -0.66
LIMD1-203ENST00000465039 RBM7Q9Y580 266 aaKnown RBP10.93□□□□□ -0.66
LIMD1-203ENST00000465039 H0YJW9 148 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 GABARAPH6UMI1 98 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 CTDSP2O14595 271 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 PROP1O75360 226 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 PPYP01298 95 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 AMY1AP04745 511 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 AMY2AP04746 511 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 PTHLHP12272 177 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 CD24P25063 80 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 PTBP1P26599 531 aaKnown RBP eCLIP10.92□□□□□ -0.66
LIMD1-203ENST00000465039 THBS3P49746 956 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 RPL39P5Q59GN2 51 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 VAX1Q5SQQ9 334 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 DHRS11Q6UWP2 260 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 SNX29P2Q8IUI4 249 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 FAM71E2Q8N5Q1 922 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 NPBQ8NG41 125 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 OR5H2Q8NGV7 314 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 SMIM4Q8WVI0 70 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 DIRAS2Q96HU8 199 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 HSD17B10Q99714 261 aaKnown RBP10.92□□□□□ -0.66
LIMD1-203ENST00000465039 SDHAF2Q9NX18 166 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 MTFP1Q9UDX5 166 aa10.92□□□□□ -0.66
LIMD1-203ENST00000465039 M0R1X1 148 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 KCNAB3O43448 404 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 NFYAP23511 347 aaPredicted RBP10.91□□□□□ -0.66
LIMD1-203ENST00000465039 FCGR2CP31995 323 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 S100A5P33763 92 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 CBX3Q13185 183 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 ZNF660Q6AZW8 331 aaPredicted RBP10.91□□□□□ -0.66
LIMD1-203ENST00000465039 FAM131AQ6UXB0 335 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 FCAMRQ8WWV6 532 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 ABHD1Q96SE0 405 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 PLSCR3Q9NRY6 295 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 SERTAD4Q9NUC0 356 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 TAS2R8Q9NYW2 309 aa10.91□□□□□ -0.66
LIMD1-203ENST00000465039 IGHV3-72A0A0B4J1Y9 119 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 NBR2O15453 112 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 GSTZ1O43708 216 aaPredicted RBP10.9□□□□□ -0.66
LIMD1-203ENST00000465039 NDUFA3O95167 84 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 IGHG2P01859 326 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 LGALS7P47929 136 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 RTL8BQ17RB0 113 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 ZNF66Q6ZN08 573 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 LYSMD2Q8IV50 215 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 ARRDC1Q8N5I2 433 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 ZNF383Q8NA42 475 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 DDB2Q92466 427 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 MOB3AQ96BX8 217 aa10.9□□□□□ -0.66
LIMD1-203ENST00000465039 TSNAXQ99598 290 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms