RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CLTCL1P53675 1640 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 CABIN1Q9Y6J0 2220 aa2.13□□□□□ -2.07
HMGXB4-205ENST00000464480 ADGRB3O60242 1522 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TRAV30A0A087WSZ9 112 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 IGHV7-4-1A0A0J9YVY3 117 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 C5orf63A6NC05 138 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SLC22A20A6NK97 555 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 COLCA2A8K830 154 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF850A8MQ14 1090 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 D6RAR5 112 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 M0QXV9 152 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 M0R233 179 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 GPR31O00270 319 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TNFRSF11BO00300 401 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 UBFD1O14562 309 aaKnown RBP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 AZIN1O14977 448 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 HPGDSO60760 199 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 EDF1O60869 148 aaKnown RBP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 RCBTB2O95199 551 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 IFNA1P01562 189 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 MT-ND4LP03901 98 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TYMSP04818 313 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 CRYBA1P05813 215 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TACSTD2P09758 323 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 PMCHP20382 165 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 RPS3P23396 243 aaKnown RBP eCLIP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 HTR2CP28335 458 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 CMPK1P30085 196 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ADORA1P30542 326 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SLC18A1P54219 525 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ARPP19P56211 112 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TPI1P60174 286 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 RAB8AP61006 207 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 NCS1P62166 190 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 HBA1P69905 142 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 PNOCQ13519 176 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 NEDD8Q15843 81 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TNXAQ16473 311 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TMEM241Q24JQ0 296 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 PLPPR5Q32ZL2 321 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 CEACAM21Q3KPI0 293 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TMEM69Q5SWH9 247 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 NCMAPQ5T1S8 102 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TMEM42Q69YG0 159 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 DRAM2Q6UX65 266 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 OLIG3Q7RTU3 272 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ZNF720Q7Z2F6 126 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 NEGR1Q7Z3B1 354 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 HMGN2P46Q86SG4 172 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 NIT1Q86X76 327 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SYS1Q8N2H4 156 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 RNF182Q8N6D2 247 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 LFNGQ8NES3 379 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 BPIFB6Q8NFQ5 453 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 OR4M1Q8NGD0 313 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 OR4P4Q8NGL7 312 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 OR5AR1Q8NGP9 310 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 OR6N2Q8NGY6 317 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 OR13G1Q8NGZ3 307 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 LGALS14Q8TCE9 139 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TFGQ92734 400 aaPredicted RBP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 NAT6Q93015 286 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ISOC2Q96AB3 205 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SLC25A46Q96AG3 418 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 DYNLL2Q96FJ2 89 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 MRAP2Q96G30 205 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SMARCD1Q96GM5 515 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TMEM243Q9BU79 118 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SUCNR1Q9BXA5 334 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 MAP1LC3CQ9BXW4 147 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 RSPO3Q9BXY4 272 aaPredicted RBP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ABCG5Q9H222 651 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SYT4Q9H2B2 425 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 PLEKHA1Q9HB21 404 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 FBXO6Q9NRD1 293 aaPredicted RBP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SPANXB1Q9NS25 103 aaPredicted RBP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 C14orf166Q9Y224 244 aaKnown RBP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 SLC35A3Q9Y2D2 325 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 MYH7BA7E2Y1 1941 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 TCHHQ07283 1943 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 BIVM-ERCC5R4GMW8 1640 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 IQSEC2Q5JU85 1478 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ABCC10Q5T3U5 1492 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 RPRD2Q5VT52 1461 aaKnown RBP2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ARHGEF11O15085 1522 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 EFCAB6Q5THR3 1501 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 ARAP3Q8WWN8 1544 aa2.12□□□□□ -2.07
HMGXB4-205ENST00000464480 MYH1P12882 1939 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MYH6P13533 1939 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 BICRAQ9NZM4 1560 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TNS2Q63HR2 1409 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 TARBP1Q13395 1621 aaKnown RBP2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 IGLV2-18A0A075B6J9 118 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 IGLV3-12A0A075B6K2 115 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 IGSF23A1L1A6 192 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 PRORSD1PA6NEY8 169 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 OR5H1A6NKK0 313 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 J3QR89 54 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 MYL12BO14950 172 aa2.11□□□□□ -2.07
HMGXB4-205ENST00000464480 OR7C2O60412 319 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms