RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 HYDINQ4G0P3 5121 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 A0A0G2JLM5 398 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 A0A1W2PPK0 400 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 BRI3O95415 125 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 CA2P00918 260 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 UBBP0CG47 229 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 ZFP41Q8N8Y5 198 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 IL17DQ8TAD2 202 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 THRSPQ92748 146 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 NEDD4LQ96PU5 975 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 TSNAXQ99598 290 aaKnown RBP13.18□□□□□ -0.3
HMGN1-210ENST00000464078 PARP12Q9H0J9 701 aaKnown RBP13.18□□□□□ -0.3
HMGN1-210ENST00000464078 SIGLEC8Q9NYZ4 499 aa13.18□□□□□ -0.3
HMGN1-210ENST00000464078 C13orf42A0A1B0GVH6 325 aa13.17□□□□□ -0.3
HMGN1-210ENST00000464078 TAS2R43P59537 309 aa13.17□□□□□ -0.3
HMGN1-210ENST00000464078 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
HMGN1-210ENST00000464078 GTSCR1Q86UQ5 136 aa13.17□□□□□ -0.3
HMGN1-210ENST00000464078 EDARADDQ8WWZ3 215 aa13.17□□□□□ -0.3
HMGN1-210ENST00000464078 ABHD14BQ96IU4 210 aa13.17□□□□□ -0.3
HMGN1-210ENST00000464078 IGKV1-16P04430 117 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 CD1AP06126 327 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 RPS27AP62979 156 aaKnown RBP13.16□□□□□ -0.3
HMGN1-210ENST00000464078 SSBP2P81877 361 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-210ENST00000464078 MED21Q13503 144 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 C6orf201Q7Z4U5 140 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 Q8N402 240 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 GRPEL2Q8TAA5 225 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 TMEM80Q96HE8 168 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 CLCC1Q96S66 551 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 FAAP24Q9BTP7 215 aa13.16□□□□□ -0.3
HMGN1-210ENST00000464078 TRBV6-6A0A0A6YYG2 114 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 PROP1O75360 226 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 SNRPBP14678 240 aaKnown RBP13.15□□□□□ -0.3
HMGN1-210ENST00000464078 CPEP16870 476 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 MAPK3P27361 379 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-210ENST00000464078 FXYD3Q14802 87 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 PDPNQ86YL7 162 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 PTX4Q96A99 478 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 TM2D1Q9BX74 207 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 C11orf54Q9H0W9 315 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-210ENST00000464078 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 SMPD3Q9NY59 655 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-210ENST00000464078 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.3
HMGN1-210ENST00000464078 PLECQ15149 4684 aaKnown RBP13.15□□□□□ -0.31
HMGN1-210ENST00000464078 OR2A4O95047 310 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 AADACP22760 399 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 SYNJ2BPP57105 145 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 LINC00322Q6ZN03 302 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-210ENST00000464078 C10orf67Q8IYJ2 551 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 ZNF383Q8NA42 475 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 ZNF555Q8NEP9 628 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 TMEM68Q96MH6 324 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 TMEM59Q9BXS4 323 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 HIPK2Q9H2X6 1198 aa13.14□□□□□ -0.31
HMGN1-210ENST00000464078 RIMS4Q9H426 269 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-210ENST00000464078 SHISA3A0PJX4 238 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 ANKRD34BA5PLL1 514 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 DYNC1I1O14576 645 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 SLC25A17O43808 307 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 CSN3P07498 182 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 ZBTB25P24278 435 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 HTR2CP28335 458 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 HLA-DRB3P79483 266 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 C1orf100Q5SVJ3 147 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 ZNF343Q6P1L6 599 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 KCNG3Q8TAE7 436 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 TMED9Q9BVK6 235 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 TINAGL1Q9GZM7 467 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-210ENST00000464078 CHMP1AQ9HD42 196 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-210ENST00000464078 ZNF355PQ9NSJ1 428 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 OR1A1Q9P1Q5 309 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
HMGN1-210ENST00000464078 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 CEPT1Q9Y6K0 416 aa13.13□□□□□ -0.31
HMGN1-210ENST00000464078 PNMA8CA0A1B0GUJ8 204 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 APOA2P02652 100 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 CELP19835 753 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 MECP2P51608 486 aaKnown RBP13.12□□□□□ -0.31
HMGN1-210ENST00000464078 RPS16P62249 146 aaKnown RBP13.12□□□□□ -0.31
HMGN1-210ENST00000464078 UNC119Q13432 240 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 OR10K2Q6IF99 312 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 LAX1Q8IWV1 398 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 DRAXINQ8NBI3 349 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-210ENST00000464078 OR5T1Q8NG75 326 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 PHYHIPQ92561 330 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 NICN1Q9BSH3 213 aa13.12□□□□□ -0.31
HMGN1-210ENST00000464078 EFCAB10A6NFE3 127 aa13.11□□□□□ -0.31
HMGN1-210ENST00000464078 IGLV2-23P01705 113 aa13.11□□□□□ -0.31
HMGN1-210ENST00000464078 CEACAM6P40199 344 aa13.11□□□□□ -0.31
HMGN1-210ENST00000464078 ST3GAL4Q11206 333 aa13.11□□□□□ -0.31
HMGN1-210ENST00000464078 DYRK1AQ13627 763 aa13.11□□□□□ -0.31
HMGN1-210ENST00000464078 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-210ENST00000464078 USMG5Q96IX5 58 aa13.11□□□□□ -0.31
HMGN1-210ENST00000464078 RETNQ9HD89 108 aa13.11□□□□□ -0.31
HMGN1-210ENST00000464078 ZNF221Q9UK13 617 aa13.11□□□□□ -0.31
HMGN1-210ENST00000464078 IZUMO1RA6ND01 250 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 TMEM14DPA8MWL7 114 aa13.1□□□□□ -0.31
HMGN1-210ENST00000464078 CNIH1O95406 144 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms