RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 FOXH1O75593 365 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 TK1P04183 234 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 WNT2P09544 360 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 UBBP0CG47 229 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 RPS2P15880 293 aaKnown RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CCL3L1P16619 93 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 RCC1P18754 421 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CPT2P23786 658 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 SSTR5P35346 364 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ETV6P41212 452 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PSMD7P51665 324 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CAPZA1P52907 286 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 RAG2P55895 527 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PAX2Q02962 417 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 DYNC1I2Q13409 638 aaKnown RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 EDDM3AQ14507 147 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 GNMTQ14749 295 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 HFEQ30201 348 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 SMIM21Q3B7S5 101 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CDNFQ49AH0 187 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 TMEM69Q5SWH9 247 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 METTL11BQ5VVY1 283 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 FAM131AQ6UXB0 335 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 C11orf42Q8N5U0 333 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ASCC1Q8N9N2 400 aaKnown RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 TMEM185AQ8NFB2 350 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 OR11L1Q8NGX0 322 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 LINC01006Q8NI28 216 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 GPX8Q8TED1 209 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 AP3S1Q92572 193 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ERGIC1Q969X5 290 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PTX4Q96A99 478 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 MRGPRFQ96AM1 343 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 RAB3CQ96E17 227 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 S100A13Q99584 98 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 EGLN1Q9GZT9 426 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CST11Q9H112 138 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 GHRLQ9UBU3 117 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 KIF25Q9UIL4 384 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ANAPC10Q9UM13 185 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 INSIG2Q9Y5U4 225 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 AUP1Q9Y679 476 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 NOTCH3Q9UM47 2321 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ARHGAP32A7KAX9 2087 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 WNK2Q9Y3S1 2297 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 IGLV5-37A0A075B6J1 123 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 IGHV3-43A0A0B4J1X8 118 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 A0A0B4J293 547 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 LINC00854A0A1B0GVQ3 168 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 A0A1W2PQ09 198 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 FABP12A6NFH5 140 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PRAC2D3DTV9 90 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 C15orf65H3BRN8 121 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 K7N7A8 449 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PLA2G10O15496 165 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF780AO75290 641 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 NAPSAO96009 420 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CYB5AP00167 134 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 IGHV3-7P01780 117 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PRB2P02812 416 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 MT-ND4P03905 459 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 OPN1MWP04001 364 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 MELTFP08582 738 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 FCGR3AP08637 254 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 SCTP09683 121 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 OPN1MW2P0DN77 364 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 OPN1MW3P0DN78 364 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CGB3P0DN86 165 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CGB7P0DN87 165 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 IGHV3-43DP0DP04 118 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 IRF2P14316 349 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 MUC1P15941 1255 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 SPNP16150 400 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 FUT3P21217 361 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PAX6P26367 422 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 BTCP35070 178 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 MDH2P40926 338 aaKnown RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 MNDAP41218 407 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 GPR12P47775 334 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 DLX6P56179 175 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 LCN2P80188 198 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 IL18Q14116 193 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 GRK1Q15835 563 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 MICBQ29980 383 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 C17orf58Q2M2W7 97 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 MPV17LQ2QL34 196 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PAN3Q58A45 887 aaKnown RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 SPIN3Q5JUX0 258 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 LDLRAD2Q5SZI1 272 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 HACD4Q5VWC8 232 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 WDR25Q64LD2 544 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF880Q6PDB4 577 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 ZNF497Q6ZNH5 498 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 TRAPPC6BQ86SZ2 158 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 CROCCP3Q8IVE0 287 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 GAPTQ8N292 157 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 PNKDQ8N490 385 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 TMEM86BQ8N661 226 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 Q8N7P7 452 aa2.89□□□□□ -1.95
SCFD1-204ENST00000463622 OR1L1Q8NH94 360 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms