RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 ZNF93P35789 620 aaPredicted RBP6.49□□□□□ -1.37
USP4-207ENST00000462673 P2RY1P47900 373 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 SUPT4H1P63272 117 aaKnown RBP6.49□□□□□ -1.37
USP4-207ENST00000462673 ARFRP1Q13795 201 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 IAH1Q2TAA2 248 aaPredicted RBP6.49□□□□□ -1.37
USP4-207ENST00000462673 SLC22A6Q4U2R8 563 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 ZNF529Q6P280 563 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 BTNL3Q6UXE8 466 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 CLEC9AQ6UXN8 241 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 FAM219AQ8IW50 185 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 C11orf53Q8IXP5 236 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 GCSAMQ8N6F7 178 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 SUMF2Q8NBJ7 301 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 DEFB108BQ8NET1 73 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 OR5D13Q8NGL4 314 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 OR13C9Q8NGT0 318 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 CLDND2Q8NHS1 167 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 HPSE2Q8WWQ2 592 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 ADAT3Q96EY9 351 aaPredicted RBP6.49□□□□□ -1.37
USP4-207ENST00000462673 GALNT14Q96FL9 552 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 POM121Q96HA1 1249 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 C1orf159Q96HA4 380 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 OR10C1Q96KK4 312 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 GINS3Q9BRX5 216 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 METTL9Q9H1A3 318 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 LPAR5Q9H1C0 372 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 SLC35B3Q9H1N7 401 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 C19orf12Q9NSK7 152 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 EHFQ9NZC4 300 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 KAAG1Q9UBP8 84 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 CLN8Q9UBY8 286 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 KCNS2Q9ULS6 477 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 NSG2Q9Y328 171 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 TMED3Q9Y3Q3 217 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 HRNRQ86YZ3 2850 aaPredicted RBP6.49□□□□□ -1.37
USP4-207ENST00000462673 ABCA12Q86UK0 2595 aa6.49□□□□□ -1.37
USP4-207ENST00000462673 ARID1AO14497 2285 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 NOTCH2Q04721 2471 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 A0A087WWC5 75 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 TRBV23-1A0A0A0MS06 115 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 IGHV4-61A0A0C4DH41 118 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 A0A1W2PPE2 198 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 CYSRT1A8MQ03 144 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 SEC14L6B5MCN3 397 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 C9JQL5 133 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 C3orf80F5H4A9 247 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 TSTD3H0UI37 97 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 J3QLI3 93 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 SH2D1BO14796 132 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 GPR137BO60478 399 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 LMX1BO60663 402 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 OR2C1O95371 312 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 MPIG6BO95866 241 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 KNG1P01042 644 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 CTSDP07339 412 aaPredicted RBP6.48□□□□□ -1.37
USP4-207ENST00000462673 MSMBP08118 114 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 HOXB5P09067 269 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 PGA5P0DJD9 388 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 HOXA5P20719 270 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 AKR1C3P42330 323 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 GABRA2P47869 451 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 CDX1P47902 265 aaPredicted RBP6.48□□□□□ -1.37
USP4-207ENST00000462673 RAB4BP61018 213 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 IL15RAQ13261 267 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 RSU1Q15404 277 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 SPIN3Q5JUX0 258 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 HEPN1Q6WQI6 88 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 ETV3LQ6ZN32 361 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 ZNF826PQ6ZT77 177 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 SLC25A26Q70HW3 274 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 SGPP2Q8IWX5 399 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 OR52N4Q8NGI2 321 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 OR13D1Q8NGV5 346 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 EDARADDQ8WWZ3 215 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 GGACTQ9BVM4 153 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 SSBP3Q9BWW4 388 aaPredicted RBP6.48□□□□□ -1.37
USP4-207ENST00000462673 EIF5A2Q9GZV4 153 aaKnown RBP6.48□□□□□ -1.37
USP4-207ENST00000462673 FAM234AQ9H0X4 552 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 ELL3Q9HB65 397 aaPredicted RBP6.48□□□□□ -1.37
USP4-207ENST00000462673 SIRT7Q9NRC8 400 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 TMEM160Q9NX00 188 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 GAR1Q9NY12 217 aaKnown RBP6.48□□□□□ -1.37
USP4-207ENST00000462673 GSKIPQ9P0R6 139 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 LSM5Q9Y4Y9 91 aaKnown RBP6.48□□□□□ -1.37
USP4-207ENST00000462673 CHD3Q12873 2000 aaKnown RBP6.48□□□□□ -1.37
USP4-207ENST00000462673 DYSFO75923 2080 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 USF3Q68DE3 2245 aa6.48□□□□□ -1.37
USP4-207ENST00000462673 CSMD2Q7Z408 3487 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 LOC105371242A0A075B767 164 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 A0A0A6YYD4 124 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 SERPINE3A8MV23 424 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 ST8SIA5O15466 376 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 ADAM20O43506 726 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 GYPAP02724 150 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 PRH1P02810 166 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 PRDX2P32119 198 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 OR2B8PP59922 312 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 LMO4P61968 165 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 IL13RA2Q14627 380 aa6.47□□□□□ -1.37
USP4-207ENST00000462673 CHRFAM7AQ494W8 412 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms