RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 CELSR1Q9NYQ6 3014 aa8.69□□□□□ -1.02
RTF1-202ENST00000462276 ABCA1O95477 2261 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 WNK2Q9Y3S1 2297 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 ZFHX3Q15911 3703 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 IGHV1-69DA0A0B4J2H0 117 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 TEX13DA0A0J9YY54 714 aaPredicted RBP8.68□□□□□ -1.02
RTF1-202ENST00000462276 CENPVL3A0A0U1RRI6 287 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 LY6LH3BQJ8 138 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 MPPED1O15442 326 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 PGLYRP1O75594 196 aaPredicted RBP8.68□□□□□ -1.02
RTF1-202ENST00000462276 IGHV1-69P01742 117 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 GAPDHP04406 335 aaKnown RBP8.68□□□□□ -1.02
RTF1-202ENST00000462276 ARG1P05089 322 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 RRASP10301 218 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 ANXA3P12429 323 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 HOXB4P17483 251 aaPredicted RBP8.68□□□□□ -1.02
RTF1-202ENST00000462276 MC5RP33032 325 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 KIR2DS2P43631 304 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 THBS3P49746 956 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 SRPXP78539 464 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 DHODHQ02127 395 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 ZNF818PQ6ZRF7 136 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 TMED4Q7Z7H5 227 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 ODF3L1Q8IXM7 274 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 OR8H3Q8N146 312 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 CIARTQ8N365 385 aaPredicted RBP8.68□□□□□ -1.02
RTF1-202ENST00000462276 OR4P4Q8NGL7 312 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 LHX4Q969G2 390 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 RPEQ96AT9 228 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 GALNT14Q96FL9 552 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 ABHD14BQ96IU4 210 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 TMEM160Q9NX00 188 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 SDHAF2Q9NX18 166 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 PRELID3BQ9Y3B1 194 aa8.68□□□□□ -1.02
RTF1-202ENST00000462276 TRAV6A0A075B6T7 132 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 SAA2-SAA4A0A096LPE2 208 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 CRYM-AS1A6NIL9 109 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 SNRPGP15A8MWD9 76 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 HSD17B6O14756 317 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 SMAD7O15105 426 aaKnown RBP8.67□□□□□ -1.02
RTF1-202ENST00000462276 NPFFO15130 113 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 ARPC1BO15143 372 aaKnown RBP8.67□□□□□ -1.02
RTF1-202ENST00000462276 SLC31A2O15432 143 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 RBFOX2O43251 390 aaKnown RBP eCLIP8.67□□□□□ -1.02
RTF1-202ENST00000462276 IGLV2-14P01704 120 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 IGHV3-7P01780 117 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 SAA2P0DJI9 122 aaPredicted RBP8.67□□□□□ -1.02
RTF1-202ENST00000462276 RPA2P15927 270 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 F2RP25116 425 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 ZNF816Q0VGE8 651 aaPredicted RBP8.67□□□□□ -1.02
RTF1-202ENST00000462276 BAMBIQ13145 260 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 SCGB2A2Q13296 93 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 FAM53AQ6NSI3 398 aaPredicted RBP8.67□□□□□ -1.02
RTF1-202ENST00000462276 TGIF2LXQ8IUE1 241 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 ZNF251Q9BRH9 671 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 AIFM2Q9BRQ8 373 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
RTF1-202ENST00000462276 LIN7CQ9NUP9 197 aaKnown RBP8.67□□□□□ -1.02
RTF1-202ENST00000462276 FLNAP21333 2647 aaKnown RBP8.67□□□□□ -1.02
RTF1-202ENST00000462276 A0A0B4J2A0 478 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 A0A1W2PPE3 182 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 H0Y980 276 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 M0R1X1 148 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 ATG12O94817 140 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 DUS4LO95620 317 aaKnown RBP8.66□□□□□ -1.02
RTF1-202ENST00000462276 OR4E1P0C645 316 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 CD99P14209 185 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 ZNF16P17020 682 aaPredicted RBP8.66□□□□□ -1.02
RTF1-202ENST00000462276 AKR1C4P17516 323 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 HNF1AP20823 631 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 DUTP33316 252 aaKnown RBP8.66□□□□□ -1.02
RTF1-202ENST00000462276 RAB13P51153 203 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 CBX3Q13185 183 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 EIF4EBP1Q13541 118 aaPredicted RBP8.66□□□□□ -1.02
RTF1-202ENST00000462276 AANATQ16613 207 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 C4orf46Q504U0 113 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 PHLDA2Q53GA4 152 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 UTF1Q5T230 341 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 TPTE2P1Q5T6R2 138 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 LCE2DQ5TA82 110 aaPredicted RBP8.66□□□□□ -1.02
RTF1-202ENST00000462276 DHRS7BQ6IAN0 325 aaPredicted RBP8.66□□□□□ -1.02
RTF1-202ENST00000462276 C9orf139Q6ZV77 190 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 OR5AN1Q8NGI8 311 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 NAA60Q9H7X0 242 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 SHPKQ9UHJ6 478 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 NUP50Q9UKX7 468 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 FLVCR2Q9UPI3 526 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 C2CD3Q4AC94 2353 aa8.66□□□□□ -1.02
RTF1-202ENST00000462276 C3orf85A0A1B0GTC6 90 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 A8MV72 311 aaPredicted RBP8.65□□□□□ -1.02
RTF1-202ENST00000462276 PROP1O75360 226 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 SFT2D2O95562 160 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 FSHBP01225 129 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 IFNA2P01563 188 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 APOA2P02652 100 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 SERPINE2P07093 398 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 SPNP16150 400 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 PI3P19957 117 aa8.65□□□□□ -1.02
RTF1-202ENST00000462276 ANXA7P20073 488 aaKnown RBP8.65□□□□□ -1.02
RTF1-202ENST00000462276 BRS3P32247 399 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms