RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 LSM6P62312 80 aaKnown RBP1.89□□□□□ -2.11
VBP1-202ENST00000460509 BASP1P80723 227 aaKnown RBP1.89□□□□□ -2.11
VBP1-202ENST00000460509 BSPH1Q075Z2 132 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 SMAGPQ0VAQ4 97 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 PAFAH1B3Q15102 231 aaKnown RBP1.89□□□□□ -2.11
VBP1-202ENST00000460509 ACSM3Q53FZ2 586 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 HES3Q5TGS1 186 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 CST9Q5W186 159 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 EBLN2Q6P2I7 272 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 MTERF4Q7Z6M4 381 aaKnown RBP1.89□□□□□ -2.11
VBP1-202ENST00000460509 GPR32P1Q8NGA4 272 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 ZNRF2Q8NHG8 242 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 GALMQ96C23 342 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 OPTNQ96CV9 577 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 SMIM12Q96EX1 92 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 OR51V1Q9H2C8 321 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 TMEM106BQ9NUM4 274 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 SLC22A13Q9Y226 551 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 ITGB4P16144 1822 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 CEP170Q5SW79 1584 aa1.89□□□□□ -2.11
VBP1-202ENST00000460509 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 METTL15A6NJ78 407 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 PFDN6O15212 129 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 SULT1B1O43704 296 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 NSA2O95478 260 aaKnown RBP1.88□□□□□ -2.11
VBP1-202ENST00000460509 CALB1P05937 261 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 PPP1CCP36873 323 aaKnown RBP1.88□□□□□ -2.11
VBP1-202ENST00000460509 RANP62826 216 aaKnown RBP1.88□□□□□ -2.11
VBP1-202ENST00000460509 CCL7P80098 99 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 REEP5Q00765 189 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 MAPK14Q16539 360 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 TTC33Q6PID6 262 aaPredicted RBP1.88□□□□□ -2.11
VBP1-202ENST00000460509 RAB8BQ92930 207 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 TAMM41Q96BW9 452 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 TLCD1Q96CP7 247 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 CAPZA3Q96KX2 299 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 CCDC42Q96M95 316 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 PRAP1Q96NZ9 151 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 MAP1LC3AQ9H492 121 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 FAM206AQ9NX38 181 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 OR51B4Q9Y5P0 310 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 SNX10Q9Y5X0 201 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 ZFYVE9O95405 1425 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 YLPM1P49750 1951 aaKnown RBP1.88□□□□□ -2.11
VBP1-202ENST00000460509 SHANK3Q9BYB0 1731 aa1.88□□□□□ -2.11
VBP1-202ENST00000460509 VPS37CA5D8V6 355 aaPredicted RBP1.87□□□□□ -2.11
VBP1-202ENST00000460509 STX10O60499 249 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 OR5F1O95221 314 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 HLA-DRAP01903 254 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 TCRBP04435 133 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 IFNA16P05015 189 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 FBP1P09467 338 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 HIST1H1EP10412 219 aaKnown RBP1.87□□□□□ -2.11
VBP1-202ENST00000460509 CD99P14209 185 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 RPS12P25398 132 aaKnown RBP1.87□□□□□ -2.11
VBP1-202ENST00000460509 MIPP30301 263 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 PPP1R2P41236 205 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 GTF2BQ00403 316 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 LPCAT4Q643R3 524 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 PPP1R2P3Q6NXS1 205 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 CCDC121Q6ZUS5 278 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 VN1R4Q7Z5H5 301 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 CD200R1Q8TD46 325 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 TESCQ96BS2 214 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 C9orf16Q9BUW7 83 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 MRPS26Q9BYN8 205 aaKnown RBP1.87□□□□□ -2.11
VBP1-202ENST00000460509 XPNPEP1Q9NQW7 623 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 ALG5Q9Y673 324 aa1.87□□□□□ -2.11
VBP1-202ENST00000460509 PCF11O94913 1555 aaKnown RBP1.86□□□□□ -2.11
VBP1-202ENST00000460509 LCTP09848 1927 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 M0QYV0 167 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 DENRO43583 198 aaKnown RBP1.86□□□□□ -2.11
VBP1-202ENST00000460509 DCTN3O75935 186 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 CFL1P23528 166 aaKnown RBP1.86□□□□□ -2.11
VBP1-202ENST00000460509 HSD11B1P28845 292 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 RPL12P30050 165 aaKnown RBP1.86□□□□□ -2.11
VBP1-202ENST00000460509 ADORA1P30542 326 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 CAPZBP47756 277 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 IDH3GP51553 393 aaPredicted RBP1.86□□□□□ -2.11
VBP1-202ENST00000460509 RAP1GDS1P52306 607 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 CXCR4P61073 352 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 HTR4Q13639 388 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 PDK2Q15119 407 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 CENPWQ5EE01 88 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 HENMT1Q5T8I9 393 aaKnown RBP1.86□□□□□ -2.11
VBP1-202ENST00000460509 SPATA31B1PQ5VZV4 182 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 Q6ZRU5 148 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 DOLPP1Q86YN1 238 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 OR4C16Q8NGL9 310 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 PACRGQ96M98 296 aaPredicted RBP1.86□□□□□ -2.11
VBP1-202ENST00000460509 MROQ9BYG7 248 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 C11orf49Q9H6J7 331 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 UBQLN4Q9NRR5 601 aa1.86□□□□□ -2.11
VBP1-202ENST00000460509 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.86□□□□□ -2.11
VBP1-202ENST00000460509 CAMSAP1Q5T5Y3 1602 aa1.85□□□□□ -2.11
VBP1-202ENST00000460509 A0A0J9YX75 114 aa1.85□□□□□ -2.11
VBP1-202ENST00000460509 KCNK1O00180 336 aa1.85□□□□□ -2.11
VBP1-202ENST00000460509 ATP5G1P05496 136 aa1.85□□□□□ -2.11
VBP1-202ENST00000460509 LINC00614P0C842 121 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms