RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-208	ENST00000460132	GSTT2B	P0CG30	244 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	HIST1H1D	P16402	221 aa	Known RBP	11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	MC5R	P33032	325 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	MYCNOS	P40205	109 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	LINC00205	P59089	165 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	IGSF11	Q5DX21	431 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	OR5AN1	Q8NGI8	311 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	MAFIP	Q8WZ33	124 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	DUX3	Q96PT4	197 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	P2RX4	Q99571	388 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	ATG5	Q9H1Y0	275 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	OR51E2	Q9H255	320 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	OR51J1	Q9H342	316 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	KIAA1456	Q9P272	454 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	ZNF221	Q9UK13	617 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132	SSR3	Q9UNL2	185 aa		11.44	□□□□□ -0.58
PLOD3-208	ENST00000460132		H7C2Y5	167 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	BET1	O15155	118 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	ATP6V0E1	O15342	81 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	GSTP1	P09211	210 aa	Known RBP	11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	PSMB8	P28062	276 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	CDX1	P47902	265 aa	Predicted RBP	11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	SERPINB10	P48595	397 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	KIR2DS1	Q14954	304 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	TPRA1	Q86W33	373 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	ZNF383	Q8NA42	475 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	RAX2	Q96IS3	184 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	CHCHD6	Q9BRQ6	235 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	TOLLIP	Q9H0E2	274 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	FBXL15	Q9H469	300 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	PARP11	Q9NR21	331 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	ELF5	Q9UKW6	265 aa	Predicted RBP	11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	WASHC3	Q9Y3C0	194 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	DNAH3	Q8TD57	4116 aa		11.43	□□□□□ -0.58
PLOD3-208	ENST00000460132	TRBV6-7	A0A0A0MS04	114 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	CCL24	O00175	119 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	FCN1	O00602	326 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	RRH	O14718	337 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	DUS4L	O95620	317 aa	Known RBP	11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	OR5H8	P0DN80	308 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	PPIF	P30405	207 aa	Known RBP	11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	ARFRP1	Q13795	201 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	NEDD8	Q15843	81 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	DEFB136	Q30KP8	78 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	CDNF	Q49AH0	187 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	OR10J5	Q8NHC4	309 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	CABLES2	Q9BTV7	478 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	KLK15	Q9H2R5	256 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	RNF167	Q9H6Y7	350 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	DAPK2	Q9UIK4	370 aa		11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	RRP15	Q9Y3B9	282 aa	Known RBP	11.42	□□□□□ -0.58
PLOD3-208	ENST00000460132	IGKV1D-8	A0A087WSZ0	117 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	TRAV41	A0A0B4J266	112 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	RBBP9	O75884	186 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	IGKV1-16	P04430	117 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	TFAP2A	P05549	437 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	CLEC2L	P0C7M8	214 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	OR8U9	P0C7N5	309 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	SNRPB	P14678	240 aa	Known RBP	11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	SDC2	P34741	201 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	TALDO1	P37837	337 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	KRTAP10-11	P60412	298 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	CX3CL1	P78423	397 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	KIAA0141	Q14154	515 aa	Predicted RBP	11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	KCTD21	Q4G0X4	260 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	OR8U1	Q8NH10	309 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	MRAP	Q8TCY5	172 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	RNF5	Q99942	180 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	FBXO7	Q9Y3I1	522 aa		11.41	□□□□□ -0.58
PLOD3-208	ENST00000460132	LOC100506127	A0A0U1RQW1	187 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132		M0R1X1	148 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	DIRAS3	O95661	229 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	IGLV1-40	P01703	118 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	HOXD3	P31249	432 aa	Predicted RBP	11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	NDP	Q00604	133 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	MXD1	Q05195	221 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	ARL6IP1	Q15041	203 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	PLGLA	Q15195	96 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	PSG5	Q15238	335 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	SFXN4	Q6P4A7	337 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	TMEM65	Q6PI78	240 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132		Q6ZS49	121 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	MINDY2	Q8NBR6	621 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	MYOZ3	Q8TDC0	251 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	OR2D2	Q9H210	308 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	SDHAF2	Q9NX18	166 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	GAB2	Q9UQC2	676 aa		11.4	□□□□□ -0.58
PLOD3-208	ENST00000460132	EGR2	P11161	476 aa	Predicted RBP	11.39	□□□□□ -0.59
PLOD3-208	ENST00000460132	CD36	P16671	472 aa		11.39	□□□□□ -0.59
PLOD3-208	ENST00000460132	RAB25	P57735	213 aa		11.39	□□□□□ -0.59
PLOD3-208	ENST00000460132	RPS16	P62249	146 aa	Known RBP	11.39	□□□□□ -0.59
PLOD3-208	ENST00000460132	EGFEM1P	Q0D2K5	195 aa		11.39	□□□□□ -0.59
PLOD3-208	ENST00000460132	C19orf54	Q5BKX5	351 aa		11.39	□□□□□ -0.59
PLOD3-208	ENST00000460132	HACD4	Q5VWC8	232 aa		11.39	□□□□□ -0.59
PLOD3-208	ENST00000460132	LGALS14	Q8TCE9	139 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms