RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 FAM25GB3EWG6 89 aa17.3■□□□□ 0.36
SSNA1-202ENST00000459860 HPGDSO60760 199 aa17.3■□□□□ 0.36
SSNA1-202ENST00000459860 MC5RP33032 325 aa17.3■□□□□ 0.36
SSNA1-202ENST00000459860 SRSF4Q08170 494 aaKnown RBP17.3■□□□□ 0.36
SSNA1-202ENST00000459860 SPCS2Q15005 226 aa17.3■□□□□ 0.36
SSNA1-202ENST00000459860 Q6ZS46 218 aa17.3■□□□□ 0.36
SSNA1-202ENST00000459860 RASL11BQ9BPW5 248 aa17.3■□□□□ 0.36
SSNA1-202ENST00000459860 SH2D7A6NKC9 451 aaPredicted RBP17.29■□□□□ 0.36
SSNA1-202ENST00000459860 H7C2Y5 167 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 AMY1AP04745 511 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 AMY2AP04746 511 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 PTHLHP12272 177 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 PRSS3P35030 304 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 MMDQ15546 238 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 TMEM95Q3KNT9 176 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 FAM131AQ6UXB0 335 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 GVQW1Q8N7I0 195 aa17.29■□□□□ 0.36
SSNA1-202ENST00000459860 LIN7CQ9NUP9 197 aaKnown RBP17.29■□□□□ 0.36
SSNA1-202ENST00000459860 MRPS7Q9Y2R9 242 aaKnown RBP17.29■□□□□ 0.36
SSNA1-202ENST00000459860 M0R1X1 148 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 APOA2P02652 100 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 CT45A6P0DMU7 189 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 CT45A5P0DMU8 189 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 CT45A7P0DMV0 189 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 ELK1P19419 428 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 KRTAP10-3P60369 221 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 ACTBP60709 375 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 NECAP2Q9NVZ3 263 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 KIAA1456Q9P272 454 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 WASHC3Q9Y3C0 194 aa17.28■□□□□ 0.36
SSNA1-202ENST00000459860 TET2Q6N021 2002 aaPredicted RBP17.27■□□□□ 0.36
SSNA1-202ENST00000459860 MEIS3P1A6NDR6 274 aa17.27■□□□□ 0.36
SSNA1-202ENST00000459860 CCDC160A6NGH7 325 aa17.27■□□□□ 0.36
SSNA1-202ENST00000459860 NFYAP23511 347 aaPredicted RBP17.27■□□□□ 0.36
SSNA1-202ENST00000459860 LUMP51884 338 aaPredicted RBP17.27■□□□□ 0.36
SSNA1-202ENST00000459860 TREML4Q6UXN2 200 aa17.27■□□□□ 0.36
SSNA1-202ENST00000459860 GLDNQ6ZMI3 551 aaPredicted RBP17.27■□□□□ 0.36
SSNA1-202ENST00000459860 ISOC1Q96CN7 298 aa17.27■□□□□ 0.36
SSNA1-202ENST00000459860 GAB2Q9UQC2 676 aa17.27■□□□□ 0.36
SSNA1-202ENST00000459860 OR2W1Q9Y3N9 320 aa17.27■□□□□ 0.36
SSNA1-202ENST00000459860 H0YJW9 148 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 M0QZ24 198 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 RGS5O15539 181 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 FBXO24O75426 580 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 RBBP9O75884 186 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 CBX3Q13185 183 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 SLC35E3Q7Z769 313 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 FOXRED2Q8IWF2 684 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 Q8N9W7 124 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 DRAXINQ8NBI3 349 aaPredicted RBP17.26■□□□□ 0.35
SSNA1-202ENST00000459860 OR5AN1Q8NGI8 311 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 WNT10AQ9GZT5 417 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 SDHAF2Q9NX18 166 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 CCDC59Q9P031 241 aaKnown RBP17.26■□□□□ 0.35
SSNA1-202ENST00000459860 ADAM30Q9UKF2 790 aa17.26■□□□□ 0.35
SSNA1-202ENST00000459860 H3BMQ9 156 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 J3QRK9 145 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 NBR2O15453 112 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 SLC22A5O76082 557 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 FCER2P06734 321 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 CENPVQ7Z7K6 275 aaPredicted RBP17.25■□□□□ 0.35
SSNA1-202ENST00000459860 SNX29P2Q8IUI4 249 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 OR5AP2Q8NGF4 316 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 SCPEP1Q9HB40 452 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 PLSCR3Q9NRY6 295 aa17.25■□□□□ 0.35
SSNA1-202ENST00000459860 IGHG2P01859 326 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 THBS3P49746 956 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 F2RL1P55085 397 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 TAGLNQ01995 201 aaKnown RBP17.24■□□□□ 0.35
SSNA1-202ENST00000459860 CDK10Q15131 360 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 PDLIM3Q53GG5 364 aaPredicted RBP17.24■□□□□ 0.35
SSNA1-202ENST00000459860 PDPNQ86YL7 162 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 FAM71E2Q8N5Q1 922 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 ZNF645Q8N7E2 425 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 C11orf44Q8N8P7 122 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 DYNC2LI1Q8TCX1 351 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 ADTRPQ96IZ2 230 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 SLC35D1Q9NTN3 355 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 EXTL2Q9UBQ6 330 aa17.24■□□□□ 0.35
SSNA1-202ENST00000459860 PROP1O75360 226 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 HLA-DQB1P01920 261 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 OR5H8P0DN80 308 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 TAS2R46P59540 309 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 PLGLAQ15195 96 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 ZNF383Q8NA42 475 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 CHPT1Q8WUD6 406 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 C15orf40Q8WUR7 153 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 SNAPC3Q92966 411 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 RNF5Q99942 180 aa17.23■□□□□ 0.35
SSNA1-202ENST00000459860 FCGR2CP31995 323 aa17.22■□□□□ 0.35
SSNA1-202ENST00000459860 DEFA6Q01524 100 aa17.22■□□□□ 0.35
SSNA1-202ENST00000459860 RTL8BQ17RB0 113 aa17.22■□□□□ 0.35
SSNA1-202ENST00000459860 C2orf68Q2NKX9 166 aa17.22■□□□□ 0.35
SSNA1-202ENST00000459860 OR5AU1Q8NGC0 362 aa17.22■□□□□ 0.35
SSNA1-202ENST00000459860 OR4X2Q8NGF9 303 aa17.22■□□□□ 0.35
SSNA1-202ENST00000459860 RBMXL1Q96E39 390 aaKnown RBP17.22■□□□□ 0.35
SSNA1-202ENST00000459860 ANAPC10Q9UM13 185 aa17.22■□□□□ 0.35
SSNA1-202ENST00000459860 CEPT1Q9Y6K0 416 aa17.22■□□□□ 0.35
SSNA1-202ENST00000459860 PSMB11A5LHX3 300 aa17.21■□□□□ 0.35
SSNA1-202ENST00000459860 AP4M1O00189 453 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms