RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TSPAN4O14817 238 aa11.38□□□□□ -0.59
CLK3-203ENST00000454830 RUNX1Q01196 453 aa11.38□□□□□ -0.59
CLK3-203ENST00000454830 TRAT1Q6PIZ9 186 aa11.38□□□□□ -0.59
CLK3-203ENST00000454830 ZNF665Q9H7R5 613 aa11.38□□□□□ -0.59
CLK3-203ENST00000454830 NDRG3Q9UGV2 375 aa11.38□□□□□ -0.59
CLK3-203ENST00000454830 DYSFO75923 2080 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 C1QTNF9BB2RNN3 333 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 IFNA5P01569 189 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 C1QTNF9P0C862 333 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 C3orf36Q3SXR2 165 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 RPL39P5Q59GN2 51 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 BARX1Q9HBU1 254 aaPredicted RBP11.37□□□□□ -0.59
CLK3-203ENST00000454830 SSUH2Q9Y2M2 353 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 NKX6-3A6NJ46 265 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 FAM157CP0CG43 387 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 TAGLNQ01995 201 aaKnown RBP11.37□□□□□ -0.59
CLK3-203ENST00000454830 KCNJ16Q9NPI9 418 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 ZNF835Q9Y2P0 537 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 ZZEF1O43149 2961 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 MED13LQ71F56 2210 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 CEBPZOSA8MTT3 80 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 CD3EP07766 207 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 LYG1Q8N1E2 194 aa11.37□□□□□ -0.59
CLK3-203ENST00000454830 EIF5A2Q9GZV4 153 aaKnown RBP11.37□□□□□ -0.59
CLK3-203ENST00000454830 FGF16O43320 207 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 SULT1A2P50226 295 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
CLK3-203ENST00000454830 NUP37Q8NFH4 326 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 CA5BP1Q8WTZ4 195 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 C14orf79Q96F83 325 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 FBXO7Q9Y3I1 522 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 SHOXO15266 292 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 ATG12O94817 140 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 IFNA17P01571 189 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 M6PRP20645 277 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 GRNP28799 593 aaKnown RBP11.36□□□□□ -0.59
CLK3-203ENST00000454830 ZBTB34Q8NCN2 500 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 SCGB1C1Q8TD33 95 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 LRRC46Q96FV0 321 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 NUP50Q9UKX7 468 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.36□□□□□ -0.59
CLK3-203ENST00000454830 LINC00473A8K010 186 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 ATP6V0CP27449 155 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 PJVKQ0ZLH3 352 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 MIDNQ504T8 468 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 ZNF561Q8N587 486 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 RBMXL1Q96E39 390 aaKnown RBP11.36□□□□□ -0.59
CLK3-203ENST00000454830 MMP26Q9NRE1 261 aa11.36□□□□□ -0.59
CLK3-203ENST00000454830 CLEC18AA5D8T8 446 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 CEBPGP53567 150 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 MORN2Q502X0 79 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 NCR3LG1Q68D85 454 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 THNSL2Q86YJ6 484 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 C1orf87Q8N0U7 546 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 CLEC18CQ8NCF0 446 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 LSM10Q969L4 123 aaKnown RBP11.35□□□□□ -0.59
CLK3-203ENST00000454830 C5orf30Q96GV9 206 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 CLN8Q9UBY8 286 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 C15orf65H3BRN8 121 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 CFHR2P36980 270 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 OR2B8PP59922 312 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 ERVFRD-1P60508 538 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 PRAMEF5Q5TYX0 476 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 VKORC1L1Q8N0U8 176 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 SAT2Q96F10 170 aaPredicted RBP11.35□□□□□ -0.59
CLK3-203ENST00000454830 DLL1O00548 723 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 PLAUP00749 431 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 AKR1C8PQ5T2L2 129 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 HINT2Q9BX68 163 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 MMP24Q9Y5R2 645 aa11.35□□□□□ -0.59
CLK3-203ENST00000454830 TRAV38-1A0A0B4J264 116 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 F2RL1P55085 397 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 ERVK-16P61578 105 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
CLK3-203ENST00000454830 CISD1Q9NZ45 108 aaKnown RBP11.34□□□□□ -0.59
CLK3-203ENST00000454830 PRELID3BQ9Y3B1 194 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 SLC31A2O15432 143 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 LHBP01229 141 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 PPT1P50897 306 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 UBE2KP61086 200 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 R3HDM4Q96D70 268 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 S1PR3Q99500 378 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
CLK3-203ENST00000454830 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
CLK3-203ENST00000454830 JPT1Q9UK76 154 aa11.34□□□□□ -0.59
CLK3-203ENST00000454830 RALYQ9UKM9 306 aaKnown RBP11.34□□□□□ -0.59
CLK3-203ENST00000454830 PPIAL4EA0A075B759 164 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 RAB19A4D1S5 217 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 PPIAL4DF5H284 164 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 PITX3O75364 302 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 SEC11BP0C7V7 166 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 PPIAL4FP0DN26 164 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 GATA4P43694 442 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 HTD2P86397 168 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 GAFA1Q96PS6 74 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 ABHD14AQ9BUJ0 271 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.59
CLK3-203ENST00000454830 PPIAL4AQ9Y536 164 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms