RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 OR5M8Q8NGP6 311 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 C4orf3Q8WVX3 66 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 FBXL15Q9H469 300 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 ZMAT5Q9UDW3 170 aaKnown RBP11.95□□□□□ -0.5
CHD3-205ENST00000449744 RNF150Q9ULK6 438 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 METTL21EPA6NDL7 271 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 G3V318 75 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 K7EIL1 84 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 RRHO14718 337 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 RAB6AP20340 208 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 PSMB9P28065 219 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 PPIFP30405 207 aaKnown RBP11.94□□□□□ -0.5
CHD3-205ENST00000449744 SERPINB10P48595 397 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 ZNF660Q6AZW8 331 aaPredicted RBP11.94□□□□□ -0.5
CHD3-205ENST00000449744 C22orf42Q6IC83 251 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 OR5AN1Q8NGI8 311 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 OR4A4PQ8NGN8 299 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 OR10R2Q8NGX6 335 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 ABHD5Q8WTS1 349 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 PTX4Q96A99 478 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 RNF5Q99942 180 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 RDH8Q9NYR8 311 aa11.94□□□□□ -0.5
CHD3-205ENST00000449744 A0A075B6Q4 140 aa11.93□□□□□ -0.5
CHD3-205ENST00000449744 SHISA3A0PJX4 238 aa11.93□□□□□ -0.5
CHD3-205ENST00000449744 FABP7O15540 132 aa11.93□□□□□ -0.5
CHD3-205ENST00000449744 TALDO1P37837 337 aa11.93□□□□□ -0.5
CHD3-205ENST00000449744 ECSCRQ19T08 205 aa11.93□□□□□ -0.5
CHD3-205ENST00000449744 MOGAT2Q3SYC2 334 aa11.93□□□□□ -0.5
CHD3-205ENST00000449744 DRAXINQ8NBI3 349 aaPredicted RBP11.93□□□□□ -0.5
CHD3-205ENST00000449744 FCGR1BQ92637 280 aa11.93□□□□□ -0.5
CHD3-205ENST00000449744 UBE2E2Q96LR5 201 aa11.93□□□□□ -0.5
CHD3-205ENST00000449744 IGKV1-6A0A0C4DH72 117 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 A0A1W2PN81 502 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 BET1O15155 118 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 APOA2P02652 100 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 TFAP2AP05549 437 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 FCGR3AP08637 254 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 GNB3P16520 340 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 CHRNA7P36544 502 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
CHD3-205ENST00000449744 CX3CL1P78423 397 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 TMEM267Q0VDI3 215 aaPredicted RBP11.92□□□□□ -0.5
CHD3-205ENST00000449744 ARFRP1Q13795 201 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 UBE2UQ5VVX9 321 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 SPARTQ8N0X7 666 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 OR11H1Q8NG94 326 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 OR10J5Q8NHC4 309 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 TSNAXQ99598 290 aaKnown RBP11.92□□□□□ -0.5
CHD3-205ENST00000449744 YTHDF1Q9BYJ9 559 aaKnown RBP11.92□□□□□ -0.5
CHD3-205ENST00000449744 ATG5Q9H1Y0 275 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 METTL1Q9UBP6 276 aaKnown RBP11.92□□□□□ -0.5
CHD3-205ENST00000449744 VSIG4Q9Y279 399 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 KCNK7Q9Y2U2 307 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 A3GALT2U3KPV4 340 aa11.92□□□□□ -0.5
CHD3-205ENST00000449744 A0A0B4J203 849 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 M0R1X1 148 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 RAB27BO00194 218 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 MFNGO00587 321 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 GSTT2P0CG29 244 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 GSTT2BP0CG30 244 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 HIST1H1DP16402 221 aaKnown RBP11.91□□□□□ -0.5
CHD3-205ENST00000449744 RAB9AP51151 201 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 DGCR2P98153 550 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 ARL6IP1Q15041 203 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 C9orf66Q5T8R8 295 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 PDPNQ86YL7 162 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 ZNF491Q8N8L2 437 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.91□□□□□ -0.5
CHD3-205ENST00000449744 MYOZ3Q8TDC0 251 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 OR5B12Q96R08 314 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 CLCC1Q96S66 551 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 CENPOQ9BU64 300 aa11.91□□□□□ -0.5
CHD3-205ENST00000449744 RBM7Q9Y580 266 aaKnown RBP11.91□□□□□ -0.5
CHD3-205ENST00000449744 SMIM30A4D0T7 59 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 PROP1O75360 226 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 OR8U9P0C7N5 309 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 NDPQ00604 133 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 PSG5Q15238 335 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 IGSF11Q5DX21 431 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 ZNF383Q8NA42 475 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 MINDY2Q8NBR6 621 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 OR1N2Q8NGR9 330 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 FLYWCH2Q96CP2 140 aaKnown RBP11.9□□□□□ -0.5
CHD3-205ENST00000449744 GINS4Q9BRT9 223 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 CABLES2Q9BTV7 478 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 TOLLIPQ9H0E2 274 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 OR2D2Q9H210 308 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 GNB4Q9HAV0 340 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 SLC35D1Q9NTN3 355 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 TXNL4BQ9NX01 149 aaKnown RBP11.9□□□□□ -0.5
CHD3-205ENST00000449744 ZNF230Q9UIE0 474 aaPredicted RBP11.9□□□□□ -0.5
CHD3-205ENST00000449744 STUB1Q9UNE7 303 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 SSR3Q9UNL2 185 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 FOXA2Q9Y261 457 aaPredicted RBP11.9□□□□□ -0.5
CHD3-205ENST00000449744 FBXO7Q9Y3I1 522 aa11.9□□□□□ -0.5
CHD3-205ENST00000449744 TRBV6-7A0A0A0MS04 114 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms