RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 IL3RAP26951 378 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 REG1BP48304 166 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 TAS2R31P59538 309 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 C1orf229Q6ZS94 237 aaPredicted RBP11.89□□□□□ -0.51
TNF-208ENST00000449264 TBC1D26Q86UD7 250 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 SLC25A42Q86VD7 318 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 DRAXINQ8NBI3 349 aaPredicted RBP11.89□□□□□ -0.51
TNF-208ENST00000449264 AKR1E2Q96JD6 320 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 S1PR3Q99500 378 aa11.89□□□□□ -0.51
TNF-208ENST00000449264 SONP18583 2426 aaKnown RBP11.88□□□□□ -0.51
TNF-208ENST00000449264 CENPVL3A0A0U1RRI6 287 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 BUB1B-PAK6H3BSN5 160 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 DHFRP00374 187 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 AVPP01185 164 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 OR4E1P0C645 316 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 UBE2E1P51965 193 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 LGALS4P56470 323 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 PPP1R1AQ13522 171 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 DIAPH2-AS1Q14236 149 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 TATDN3Q17R31 274 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 LHFPL4Q7Z7J7 247 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 OR52B4Q8NGK2 314 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 SEC22CQ9BRL7 303 aa11.88□□□□□ -0.51
TNF-208ENST00000449264 A0A0B4J293 547 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 PGLYRP1O75594 196 aaPredicted RBP11.87□□□□□ -0.51
TNF-208ENST00000449264 HLA-AP01891 365 aaKnown RBP11.87□□□□□ -0.51
TNF-208ENST00000449264 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 HTR1DP28221 377 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 LINC00205P59089 165 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 OR2B11Q5JQS5 317 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 GPR157Q5UAW9 335 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 RUSC1-AS1Q66K80 236 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 ZNF833PQ6ZTB9 187 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 SGPP2Q8IWX5 399 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.87□□□□□ -0.51
TNF-208ENST00000449264 ZBTB34Q8NCN2 500 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 RPEQ96AT9 228 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 ZNF251Q9BRH9 671 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 GHITMQ9H3K2 345 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 NAA60Q9H7X0 242 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 hCG_2014768A0A024R1R8 64 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 CRYM-AS1A6NIL9 109 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 MPPED1O15442 326 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 PROP1O75360 226 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 MECP2P51608 486 aaKnown RBP11.87□□□□□ -0.51
TNF-208ENST00000449264 RAG2P55895 527 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 RND3P61587 244 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 CBX3Q13185 183 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 DHRS2Q13268 280 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 SLC9A3R2Q15599 337 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 MSMO1Q15800 293 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 LDLRAD2Q5SZI1 272 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 BRD3OSQ6XYD6 125 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 GLDNQ6ZMI3 551 aaPredicted RBP11.87□□□□□ -0.51
TNF-208ENST00000449264 KCTD9Q7L273 389 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 CASTOR1Q8WTX7 329 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 TCTEX1D2Q8WW35 142 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 C18orf12Q96KH6 178 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
TNF-208ENST00000449264 HILPDAQ9Y5L2 63 aa11.87□□□□□ -0.51
TNF-208ENST00000449264 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 LINC00473A8K010 186 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 LEUTXA8MZ59 168 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 NPFFO15130 113 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 IGHV1-69P01742 117 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 OR5AC1P0C628 307 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 PAX6P26367 422 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 DUTP33316 252 aaKnown RBP11.86□□□□□ -0.51
TNF-208ENST00000449264 SAA4P35542 130 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 ZNF137PP52743 207 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 UBE2MP61081 183 aaKnown RBP11.86□□□□□ -0.51
TNF-208ENST00000449264 RPL30P62888 115 aaKnown RBP11.86□□□□□ -0.51
TNF-208ENST00000449264 SUPT4H1P63272 117 aaKnown RBP11.86□□□□□ -0.51
TNF-208ENST00000449264 KRTAP1-1Q07627 177 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 CATR1Q13166 79 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 TGIF2LXQ8IUE1 241 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 ST6GALNAC6Q969X2 333 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 HSD17B10Q99714 261 aaKnown RBP11.86□□□□□ -0.51
TNF-208ENST00000449264 LIN7CQ9NUP9 197 aaKnown RBP11.86□□□□□ -0.51
TNF-208ENST00000449264 PRR13Q9NZ81 148 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 DPM3Q9P2X0 92 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 ALG5Q9Y673 324 aa11.86□□□□□ -0.51
TNF-208ENST00000449264 C3orf85A0A1B0GTC6 90 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 CYSRT1A8MQ03 144 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 RNF212BA8MTL3 300 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 PRAF2O60831 178 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 CEACAM3P40198 252 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 EIF4EBP1Q13541 118 aaPredicted RBP11.85□□□□□ -0.51
TNF-208ENST00000449264 SP6Q3SY56 376 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 KLF17Q5JT82 389 aaPredicted RBP11.85□□□□□ -0.51
TNF-208ENST00000449264 TPTE2P1Q5T6R2 138 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 ZNF66Q6ZN08 573 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 Q6ZNX1 250 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 LYG2Q86SG7 212 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 C17orf50Q8WW18 174 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 TP53RKQ96S44 253 aa11.85□□□□□ -0.51
TNF-208ENST00000449264 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
TNF-208ENST00000449264 GAB2Q9UQC2 676 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms