RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 IGKV1D-8A0A087WSZ0 117 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 OR4C46A6NHA9 309 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 C2orf70A6NJV1 201 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 SOX1O00570 391 aaPredicted RBP9.13□□□□□ -0.95
LINC00342-202ENST00000448494 ADAM20O43506 726 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 CHST1O43916 411 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 PSG2P11465 335 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 IGFBP2P18065 325 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 F2RP25116 425 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 PAX9P55771 341 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 CLDN17P56750 224 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 FKBP1BP68106 108 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 ZIC1Q15915 447 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 TMEM97Q5BJF2 176 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 PLPP4Q5VZY2 271 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 RNF44Q7L0R7 432 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 CDRT4Q8N9R6 151 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 LSM10Q969L4 123 aaKnown RBP9.13□□□□□ -0.95
LINC00342-202ENST00000448494 C10orf35Q96D05 121 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 CITED2Q99967 270 aaPredicted RBP9.13□□□□□ -0.95
LINC00342-202ENST00000448494 NAT8BQ9UHF3 227 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 HSPB8Q9UJY1 196 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 UFC1Q9Y3C8 167 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 PTGDSP41222 190 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 PHLDA2Q53GA4 152 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 FAM57BQ71RH2 274 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 SMIM20Q8N5G0 67 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 RPP25LQ8N5L8 163 aaKnown RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 C2orf73Q8N5S3 287 aaPredicted RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 OR51T1Q8NGJ9 327 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF501Q96CX3 271 aaPredicted RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 ADAT3Q96EY9 351 aaPredicted RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 GRAMD2BQ96HH9 432 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 TMEM70Q9BUB7 260 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF391Q9UJN7 358 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 HEATR5BQ9P2D3 2071 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 A0A087X0K7 114 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 MBLAC1A4D2B0 266 aaPredicted RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 C11orf94C9JXX5 98 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 PAGE4O60829 102 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 MT-ATP6P00846 226 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 HIST1H1EP10412 219 aaKnown RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 PEBP1P30086 187 aaKnown RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 ID1P41134 155 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 EMDP50402 254 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.12□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF525Q8N782 197 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 C19orf24Q9BVV8 132 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 TMEM222Q9H0R3 208 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 LIME1Q9H400 295 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 ARL2-SNX15V9GYD0 113 aa9.12□□□□□ -0.95
LINC00342-202ENST00000448494 DNAJC25-GNG10A0A024R161 153 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 FBLL1A6NHQ2 334 aaKnown RBP9.11□□□□□ -0.95
LINC00342-202ENST00000448494 GRXCR1A8MXD5 290 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 SLC31A1O15431 190 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 FABP2P12104 132 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 BLVRBP30043 206 aaPredicted RBP9.11□□□□□ -0.95
LINC00342-202ENST00000448494 RPEL1Q2QD12 228 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF695Q8IW36 515 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 RAB40CQ96S21 281 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 QTRT1Q9BXR0 403 aaKnown RBP9.11□□□□□ -0.95
LINC00342-202ENST00000448494 SPANXB1Q9NS25 103 aaPredicted RBP9.11□□□□□ -0.95
LINC00342-202ENST00000448494 SERTAD4Q9NUC0 356 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 NXT1Q9UKK6 140 aaKnown RBP9.11□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF835Q9Y2P0 537 aa9.11□□□□□ -0.95
LINC00342-202ENST00000448494 C3orf85A0A1B0GTC6 90 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 hCG_38984A0A1B0GV85 526 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 TBL1XO60907 577 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 ASAH2BP0C7U1 165 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 SRIP30626 198 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 OR3A4PP47883 348 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 FABP6P51161 128 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 GNB1P62873 340 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 ACSM6Q6P461 480 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 TMEM136Q6ZRR5 245 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 HSD11B1LQ7Z5J1 315 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 TTC9CQ8N5M4 171 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 KCNIP2Q9NS61 270 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF257Q9Y2Q1 563 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 IGKV1D-42A0A075B6H8 117 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 M0R2Z0 102 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 ISLRO14498 428 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 HSBP1O75506 76 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 STC2O76061 302 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 HLA-DQA1P01909 254 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 RPL18Q07020 188 aaKnown RBP9.1□□□□□ -0.95
LINC00342-202ENST00000448494 PRICKLE4Q2TBC4 344 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 NRN1LQ496H8 165 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 PLCXD3Q63HM9 321 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 ADAMTSL5Q6ZMM2 481 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF841Q6ZN19 808 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 C5orf30Q96GV9 206 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 OR2D2Q9H210 308 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 PLAGL1Q9UM63 463 aa9.1□□□□□ -0.95
LINC00342-202ENST00000448494 C4orf51C9J302 202 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms