RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 RAB13P51153 203 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 RPS25P62851 125 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 FABP5Q01469 135 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 UNC119Q13432 240 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 P2RY14Q15391 338 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 PLA1AQ53H76 456 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 RNASE12Q5GAN4 147 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 FAM71F2Q6NXP2 309 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 ZNF880Q6PDB4 577 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 ZNF773Q6PK81 442 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 BAIAP2L2Q6UXY1 529 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 TPRA1Q86W33 373 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 TMEM219Q86XT9 240 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 SPARTQ8N0X7 666 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 KLHDC1Q8N7A1 406 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 WIPF2Q8TF74 440 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 ST6GALNAC6Q969X2 333 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 FAM3DQ96BQ1 224 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 YPEL2Q96QA6 119 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 SLC25A33Q9BSK2 321 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 TAF9BQ9HBM6 251 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 PLEKHJ1Q9NW61 149 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 ZNF581Q9P0T4 197 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 GNG12Q9UBI6 72 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 STEAP1Q9UHE8 339 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 RAB22AQ9UL26 194 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 MOB4Q9Y3A3 225 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 NOTCH1P46531 2555 aa6.16□□□□□ -1.42
SMARCE1-206ENST00000447024 VWFP04275 2813 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 A0A1W2PPI3 338 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 METTL21EPA6NDL7 271 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 IFITM5A6NNB3 132 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 LDLRAD4O15165 306 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 SCGNO76038 276 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 OPN1MWP04001 364 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 OPN1MW2P0DN77 364 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 OPN1MW3P0DN78 364 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 RCC1P18754 421 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 RAB3BP20337 219 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 VDAC2P45880 294 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 KRTAP10-3P60369 221 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 HMGN3Q15651 99 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 SSX1Q16384 188 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 KCTD21Q4G0X4 260 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 MORN2Q502X0 79 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 C9orf47Q6ZRZ4 202 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 NDUFA11Q86Y39 141 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 ZNF439Q8NDP4 499 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 OR2T10Q8NGZ9 312 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 OR4K15Q8NH41 348 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 MRPL30Q8TCC3 161 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 CCDC107Q8WV48 283 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 RTN4IP1Q8WWV3 396 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 TAF15Q92804 592 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 FAM46BQ96A09 425 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 LPAR5Q9H1C0 372 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 C12orf4Q9NQ89 552 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 OR2S2Q9NQN1 319 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 SSR3Q9UNL2 185 aa6.15□□□□□ -1.42
SMARCE1-206ENST00000447024 IGHV1-3A0A0C4DH29 117 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 FAM172BPA6NC97 362 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 FOXI3A8MTJ6 420 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 SERPINE3A8MV23 424 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 MOSP00540 346 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 SNRNP70P08621 437 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 CSF1P09603 554 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 TMEM11P17152 192 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 GADD45AP24522 165 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 PAX6P26367 422 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 SLC6A1P30531 599 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 SERPINB10P48595 397 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 BLCAPP62952 87 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 MRPS15P82914 257 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 LTC4SQ16873 150 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 C2orf76Q3KRA6 126 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 TIMM50Q3ZCQ8 353 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 CT45A1Q5HYN5 189 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 C6orf201Q7Z4U5 140 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 TGIF2LXQ8IUE1 241 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 COMMD1Q8N668 190 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 DRAM1Q8N682 238 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 OR51D1Q8NGF3 324 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 OR56B4Q8NH76 319 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 CT45A3Q8NHU0 189 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 CHPT1Q8WUD6 406 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 LEAP2Q969E1 77 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 GFI1Q99684 422 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 SULT4A1Q9BR01 284 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 CHCHD6Q9BRQ6 235 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 FAAP24Q9BTP7 215 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 ABHD14AQ9BUJ0 271 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 STUB1Q9UNE7 303 aa6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 AK6Q9Y3D8 172 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-206ENST00000447024 TRAV39A0A0B4J263 110 aa6.13□□□□□ -1.43
SMARCE1-206ENST00000447024 RAB29O14966 203 aa6.13□□□□□ -1.43
SMARCE1-206ENST00000447024 IGHG2P01859 326 aa6.13□□□□□ -1.43
SMARCE1-206ENST00000447024 ZBTB25P24278 435 aa6.13□□□□□ -1.43
SMARCE1-206ENST00000447024 PSMB9P28065 219 aa6.13□□□□□ -1.43
SMARCE1-206ENST00000447024 GNG10P50151 68 aa6.13□□□□□ -1.43
SMARCE1-206ENST00000447024 TMEM50BP56557 158 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms