RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 AKR1C8PQ5T2L2 129 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 CCDC71LQ8N9Z2 235 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 HIST1H2BLQ99880 126 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 RIMS4Q9H426 269 aaPredicted RBP11.94□□□□□ -0.5
LIMD1-202ENST00000440097 TRAPPC2LQ9UL33 140 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 IGSF23A1L1A6 192 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 SMCO3A2RU48 225 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 PRRG2O14669 202 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 SPCS3P61009 180 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 PRAMEF6Q5VXH4 476 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 UBALD1Q8TB05 177 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 FAM57AQ8TBR7 257 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 MSI2Q96DH6 328 aaKnown RBP11.94□□□□□ -0.5
LIMD1-202ENST00000440097 GPHA2Q96T91 129 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 SLC25A15Q9Y619 301 aa11.94□□□□□ -0.5
LIMD1-202ENST00000440097 SH2D1BO14796 132 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 PHOX2AO14813 284 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 CRYAAP02489 173 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 HSPB1P04792 205 aaKnown RBP11.93□□□□□ -0.5
LIMD1-202ENST00000440097 ZNF266Q14584 549 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 ZNF506Q5JVG8 444 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 TGIF2LXQ8IUE1 241 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 LGI3Q8N145 548 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 MRPL30Q8TCC3 161 aaKnown RBP11.93□□□□□ -0.5
LIMD1-202ENST00000440097 SNX22Q96L94 193 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 POLEQ07864 2286 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 TMEM210A6NLX4 147 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 HSPA12AO43301 675 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 IGLV1-44P01699 117 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
LIMD1-202ENST00000440097 PGA5P0DJD9 388 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 PAX1P15863 534 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 HERPUD1Q15011 391 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 USF2Q15853 346 aaPredicted RBP11.93□□□□□ -0.5
LIMD1-202ENST00000440097 SLC35E3Q7Z769 313 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 OR4D5Q8NGN0 318 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 OR5R1Q8NH85 324 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 OR10J5Q8NHC4 309 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 TMEM171Q8WVE6 324 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 KIAA2026Q5HYC2 2103 aa11.93□□□□□ -0.5
LIMD1-202ENST00000440097 WNT9BO14905 357 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 TIMP3P35625 211 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 C1orf87Q8N0U7 546 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 SLC35G3Q8N808 338 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 OR2Z1Q8NG97 314 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 CXXC4Q9H2H0 198 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 WASF3Q9UPY6 502 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 RBM7Q9Y580 266 aaKnown RBP11.92□□□□□ -0.5
LIMD1-202ENST00000440097 TNFSF12O43508 249 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 CTXN2P0C2S0 81 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 MDKP21741 143 aaPredicted RBP11.92□□□□□ -0.5
LIMD1-202ENST00000440097 RPL23AP62750 156 aaKnown RBP11.92□□□□□ -0.5
LIMD1-202ENST00000440097 HLA-DRB3P79483 266 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 FAM27E3Q08E93 113 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 TIMM23BQ5SRD1 257 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 GFRALQ6UXV0 394 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 CLDND2Q8NHS1 167 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 UBE2J1Q9Y385 318 aaPredicted RBP11.92□□□□□ -0.5
LIMD1-202ENST00000440097 CACNA1BQ00975 2339 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 ITPR1Q14643 2758 aa11.92□□□□□ -0.5
LIMD1-202ENST00000440097 PITX3O75364 302 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 GNRHRP30968 328 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 UCP3P55916 312 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 RUNX1Q01196 453 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 SP5Q6BEB4 398 aaPredicted RBP11.91□□□□□ -0.5
LIMD1-202ENST00000440097 Q6P435 159 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 GAPTQ8N292 157 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 SFXN3Q9BWM7 321 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 IGKV1-6A0A0C4DH72 117 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 C3orf85A0A1B0GTC6 90 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 NKX2-6A6NCS4 301 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 SLC33A1O00400 549 aaPredicted RBP11.91□□□□□ -0.5
LIMD1-202ENST00000440097 TCAPO15273 167 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 HAND1O96004 215 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 TBR1Q16650 682 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 Q6ZR03 302 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 Q6ZS49 121 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 TP53RKQ96S44 253 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 NEU1Q99519 415 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 C11orf1Q9H5F2 150 aa11.91□□□□□ -0.5
LIMD1-202ENST00000440097 IGKV1D-13A0A0B4J2D9 117 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 MPPED1O15442 326 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 FAM87AP0C7U9 286 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 IGKV1-13P0DP09 117 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 ERVK11-1P61568 191 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 LBHQ53QV2 105 aaPredicted RBP11.9□□□□□ -0.5
LIMD1-202ENST00000440097 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 TBC1D26Q86UD7 250 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 CMTM1Q8IZ96 169 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 OR5C1Q8NGR4 320 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 PLPPR1Q8TBJ4 325 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 MAGT1Q9H0U3 335 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 EPG5Q9HCE0 2579 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 A8MWP6 167 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 SSSCA1O60232 199 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 EPHA1P21709 976 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 CD200P41217 278 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms