RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 SLC31A2O15432 143 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 TNFSF12O43508 249 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 RBP4P02753 201 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 LIPFP07098 398 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 PPIAL4GP0DN37 164 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 CXCL3P19876 107 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 USF1P22415 310 aaPredicted RBP9.23□□□□□ -0.93
LINC00539-203ENST00000434601 GZMKP49863 264 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 GNG10P50151 68 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 CD300CQ08708 224 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 ANKRD55Q3KP44 614 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 LIN54Q6MZP7 749 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 KCTD9Q7L273 389 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 ZNF439Q8NDP4 499 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 AGMATQ9BSE5 352 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 SUCNR1Q9BXA5 334 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 IFI27L2Q9H2X8 130 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 RNF150Q9ULK6 438 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 SESN1Q9Y6P5 492 aa9.23□□□□□ -0.93
LINC00539-203ENST00000434601 C3orf85A0A1B0GTC6 90 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 DBX1A6NMT0 343 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 H0Y980 276 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 PGLYRP1O75594 196 aaPredicted RBP9.22□□□□□ -0.93
LINC00539-203ENST00000434601 B3GALNT1O75752 331 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 IGHV3-7P01780 117 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 IGHV1-8P0DP01 117 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 GPR12P47775 334 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 TMEM187Q14656 261 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 UTF1Q5T230 341 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 TCTE3Q8IZS6 198 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 OR5M8Q8NGP6 311 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 LEAP2Q969E1 77 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 C5orf30Q96GV9 206 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 ABHD14BQ96IU4 210 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 TP53RKQ96S44 253 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 GPHA2Q96T91 129 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 RANGRFQ9HD47 186 aaPredicted RBP9.22□□□□□ -0.93
LINC00539-203ENST00000434601 LIN7CQ9NUP9 197 aaKnown RBP9.22□□□□□ -0.93
LINC00539-203ENST00000434601 SDHAF2Q9NX18 166 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 PRR13Q9NZ81 148 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 ONECUT1Q9UBC0 465 aa9.22□□□□□ -0.93
LINC00539-203ENST00000434601 ANK3Q12955 4377 aaKnown RBP9.21□□□□□ -0.93
LINC00539-203ENST00000434601 A0A087X0M5 115 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 A0A1B0GX30 115 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 hCG_1809904A0A1W2PP81 198 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 A0A1W2PPE2 198 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 A0A1W2PPE3 182 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 A0A1W2PR64 198 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 A0A1W2PRV1 198 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 M0R1W7 72 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 ENSAO43768 121 aaKnown RBP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 HNRNPCP07910 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 GIPP09681 153 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 IGHV4-31P0DP07 118 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 SRD5A1P18405 259 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 HNF1AP20823 631 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 F2RP25116 425 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF134P52741 427 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 ERVFRD-1P60508 538 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 LMO4P61968 165 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 SRPXP78539 464 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 CATR1Q13166 79 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 EIF4EBP1Q13541 118 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 C2orf68Q2NKX9 166 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 SP6Q3SY56 376 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 CT45A1Q5HYN5 189 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 LIAT1Q6ZQX7 453 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 SLC25A48Q6ZT89 311 aaKnown RBP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 LGI3Q8N145 548 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 C11orf42Q8N5U0 333 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 OR51H1Q8NH63 302 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 CT45A3Q8NHU0 189 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 MSI2Q96DH6 328 aaKnown RBP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 FYTTD1Q96QD9 318 aaKnown RBP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF436Q9C0F3 470 aaPredicted RBP9.21□□□□□ -0.94
LINC00539-203ENST00000434601 TMEM133Q9H2Q1 129 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 RAB18Q9NP72 206 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 GAB2Q9UQC2 676 aa9.21□□□□□ -0.94
LINC00539-203ENST00000434601 SAA2-SAA4A0A096LPE2 208 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 IGHV4-61A0A0C4DH41 118 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 BOLA2-SMG1P6H3BVE0 249 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 CCSO14618 274 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 FOXH1O75593 365 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 SAA2P0DJI9 122 aaPredicted RBP9.2□□□□□ -0.94
LINC00539-203ENST00000434601 HLA-GP17693 338 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 UCP1P25874 307 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 BTNL3Q6UXE8 466 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF66Q6ZN08 573 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 LYG1Q8N1E2 194 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 LINC00311Q8N616 119 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 KIR3DL3Q8N743 410 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 LRTM2Q8N967 370 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 C8orf31Q8N9H6 132 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF596Q8TC21 504 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 GLYATL2Q8WU03 294 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 ASB13Q8WXK3 278 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 DMRTB1Q96MA1 342 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 HSD17B10Q99714 261 aaKnown RBP9.2□□□□□ -0.94
LINC00539-203ENST00000434601 CHIAQ9BZP6 476 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms