RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TMEM33P57088 247 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 RPS11P62280 158 aaKnown RBP eCLIP1.42□□□□□ -2.18
PTPN4-205ENST00000433888 LSM6P62312 80 aaKnown RBP1.42□□□□□ -2.18
PTPN4-205ENST00000433888 CTAG1AP78358 180 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 STX5Q13190 355 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 MMDQ15546 238 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 ZNF141Q15928 474 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 IMPG1Q17R60 797 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 ZCWPW2Q504Y3 356 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 PYDC2Q56P42 97 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 C1orf194Q5T5A4 169 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 SFXN4Q6P4A7 337 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 TNFAIP8L2Q6P589 184 aaPredicted RBP1.42□□□□□ -2.18
PTPN4-205ENST00000433888 WDR59Q6PJI9 974 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 TRAPPC5Q8IUR0 188 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 LRRC34Q8IZ02 419 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 EIF4E3Q8N5X7 224 aaKnown RBP1.42□□□□□ -2.18
PTPN4-205ENST00000433888 GPR32P1Q8NGA4 272 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 OR8A1Q8NGG7 326 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 OR2T27Q8NH04 317 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 MUC7Q8TAX7 377 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 Q8WTZ3 238 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 ASB17Q8WXJ9 295 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 TRIB3Q96RU7 358 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 C1orf50Q9BV19 199 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 OR51B6Q9H340 312 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 ZNF443Q9Y2A4 671 aaPredicted RBP1.42□□□□□ -2.18
PTPN4-205ENST00000433888 PCYT1BQ9Y5K3 369 aaPredicted RBP1.42□□□□□ -2.18
PTPN4-205ENST00000433888 ATAD5Q96QE3 1844 aa1.42□□□□□ -2.18
PTPN4-205ENST00000433888 NPATQ14207 1427 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 ARAP3Q8WWN8 1544 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 TRPM3Q9HCF6 1732 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 TRAV8-1A0A0A6YYK1 113 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 A0A1W2PNN7 141 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 A0A1W2PQL4 384 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 C19orf71A6NCJ1 209 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 TMEM114B3SHH9 223 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 ACOX3O15254 700 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 GSTZ1O43708 216 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 RPP14O95059 124 aaKnown RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 CNIH1O95406 144 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 OPN1SWP03999 348 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 TCRBP04435 133 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 CRYBA1P05813 215 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 SERPINA6P08185 405 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 HIST1H1EP10412 219 aaKnown RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 ESDP10768 282 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 HRES1P13985 223 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 CCL1P22362 96 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 CDK2P24941 298 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 OR10J1P30954 320 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 CD79BP40259 229 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 PPP1R2P41236 205 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 CA7P43166 264 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 AP3S2P59780 193 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 FABP5Q01469 135 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 OR8G1Q15617 311 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 DEFB134Q4QY38 66 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 PPP1R2P3Q6NXS1 205 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 DAND5Q8N907 189 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 C1orf64Q8NEQ6 169 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 OR5C1Q8NGR4 320 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 OR4K13Q8NH42 304 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 RAB2BQ8WUD1 216 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 ANKRD7Q92527 254 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 RNASE6Q93091 150 aaKnown RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 SLC25A44Q96H78 314 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 DIRAS2Q96HU8 199 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 ANKRD36BP1Q96IX9 119 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 PPP1R2P1Q96PQ5 205 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 OR7D2Q96RA2 312 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 NMNAT3Q96T66 252 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 PAIP2Q9BPZ3 127 aaKnown RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 CCDC94Q9BW85 323 aaPredicted RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 EIF5A2Q9GZV4 153 aaKnown RBP1.41□□□□□ -2.18
PTPN4-205ENST00000433888 C16orf95Q9H693 158 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 SLC2A9Q9NRM0 540 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 ASF1BQ9NVP2 202 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 POLR1DQ9Y2S0 133 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 COQ4Q9Y3A0 265 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 PXMP4Q9Y6I8 212 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 ABCC11Q96J66 1382 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 KIF15Q9NS87 1388 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 TENM1Q9UKZ4 2725 aa1.41□□□□□ -2.18
PTPN4-205ENST00000433888 DSCAMO60469 2012 aa1.4□□□□□ -2.18
PTPN4-205ENST00000433888 SDK2Q58EX2 2172 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 PRR14LQ5THK1 2151 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 PLB1Q6P1J6 1458 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 TRBV24-1A0A075B6N3 115 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 TEX50A0A1B0GTY4 177 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 LOC102725191A0A1B0GVB3 256 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 C5orf49A4QMS7 147 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 LINC00862A6NCI5 91 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 VGLL3A8MV65 326 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 GGTLC3B5MD39 225 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 INMT-MINDY4F8WBC2 141 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 IGHV3-53P01767 116 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 IFNA16P05015 189 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 CRYBB3P26998 211 aa1.4□□□□□ -2.19
PTPN4-205ENST00000433888 CEBPGP53567 150 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms