RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 PLGLAQ15195 96 aa16.92■□□□□ 0.3
RPUSD3-206ENST00000433535 C19orf54Q5BKX5 351 aa16.92■□□□□ 0.3
RPUSD3-206ENST00000433535 CD200R1LQ6Q8B3 271 aa16.92■□□□□ 0.3
RPUSD3-206ENST00000433535 ABHD5Q8WTS1 349 aa16.92■□□□□ 0.3
RPUSD3-206ENST00000433535 FCGR1BQ92637 280 aa16.92■□□□□ 0.3
RPUSD3-206ENST00000433535 PLGRKTQ9HBL7 147 aa16.92■□□□□ 0.3
RPUSD3-206ENST00000433535 DNAH9Q9NYC9 4486 aa16.92■□□□□ 0.3
RPUSD3-206ENST00000433535 H7C2Y5 167 aa16.91■□□□□ 0.3
RPUSD3-206ENST00000433535 CX3CL1P78423 397 aa16.91■□□□□ 0.3
RPUSD3-206ENST00000433535 AGMATQ9BSE5 352 aa16.91■□□□□ 0.3
RPUSD3-206ENST00000433535 URM1Q9BTM9 101 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-206ENST00000433535 AK6Q9Y3D8 172 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-206ENST00000433535 U3KQK5 164 aa16.91■□□□□ 0.3
RPUSD3-206ENST00000433535 TRBV6-6A0A0A6YYG2 114 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 FCN1O00602 326 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 SLC17A2O00624 439 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 ARL6IP5O75915 188 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 LY86O95711 162 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 GSTP1P09211 210 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 SNRPBP14678 240 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 ARSBP15848 533 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 DRAXINQ8NBI3 349 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 DCUN1D4Q92564 292 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 ASCL2Q99929 193 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 FAM103A1Q9BTL3 118 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 C11orf54Q9H0W9 315 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 RIMS4Q9H426 269 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 GAB2Q9UQC2 676 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 FOXA2Q9Y261 457 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 WASHC3Q9Y3C0 194 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 TENM3Q9P273 2699 aa16.9■□□□□ 0.3
RPUSD3-206ENST00000433535 FOXI3A8MTJ6 420 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 HSPA12AO43301 675 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 SCTP09683 121 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 NHLRC4P0CG21 123 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 PSMB9P28065 219 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 CEACAM6P40199 344 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 CRIP2P52943 208 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 SLURP1P55000 103 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 CLDN12P56749 244 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 ZNF660Q6AZW8 331 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 FAM89BQ8N5H3 189 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 OR5AN1Q8NGI8 311 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 CLCC1Q96S66 551 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 C12orf4Q9NQ89 552 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 RNF150Q9ULK6 438 aa16.89■□□□□ 0.29
RPUSD3-206ENST00000433535 TRDV1A0A1B0GX56 115 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 ITGB1BP1O14713 200 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 OVOL1O14753 267 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 EGR2P11161 476 aaPredicted RBP16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 ZBTB25P24278 435 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 CALRP27797 417 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 VEGFCP49767 419 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 LINC00205P59089 165 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 RAB11BQ15907 218 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 EDARADDQ8WWZ3 215 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 ARHGAP5-AS1Q96IT6 56 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 TOLLIPQ9H0E2 274 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 Q9N2K0 584 aa16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 METTL1Q9UBP6 276 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-206ENST00000433535 IGHV4OR15-8A0A075B7B6 117 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 A0A087WW49 117 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 PROP1O75360 226 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 RBBP9O75884 186 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 TNFAIP8O95379 198 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 GALP22466 123 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 MC5RP33032 325 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 INSL3P51460 131 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 TMEM50BP56557 158 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 DLX4Q92988 240 aaPredicted RBP16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 PECRQ9BY49 303 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 HSF4Q9ULV5 492 aa16.87■□□□□ 0.29
RPUSD3-206ENST00000433535 KMT2CQ8NEZ4 4911 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 IGKV1-6A0A0C4DH72 117 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 SHISA3A0PJX4 238 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 SAP30O75446 220 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 IGHV3-11P01762 117 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 IGKV1-16P04430 117 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 LGALS1P09382 135 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 UNQ5815/PRO19632Q6UWF5 114 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 PPP1R27Q86WC6 154 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 TCTEX1D1Q8N7M0 179 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 CMSS1Q9BQ75 279 aaKnown RBP16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 TPSG1Q9NRR2 321 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 MGAT4AQ9UM21 535 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 NUBP2Q9Y5Y2 271 aa16.86■□□□□ 0.29
RPUSD3-206ENST00000433535 TRAV1-2A0A0B4J238 106 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 LINC01619G3V211 115 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 CA2P00918 260 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 PLA2G7Q13093 441 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 PSG5Q15238 335 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 NEDD8Q15843 81 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 ACTBL2Q562R1 376 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 PLAC9Q5JTB6 97 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 ZNF429Q86V71 674 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 ZNF383Q8NA42 475 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 PTX4Q96A99 478 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 FAM3DQ96BQ1 224 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 MS4A10Q96PG2 267 aa16.85■□□□□ 0.29
RPUSD3-206ENST00000433535 GHITMQ9H3K2 345 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms