RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 HLA-DRB1P01911 266 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 PF4P02776 101 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 IGF1P05019 195 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 TFAP2AP05549 437 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 OR5H8P0DN80 308 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 VDAC1P21796 283 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 SLC6A1P30531 599 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 PNLIPRP3Q17RR3 467 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 C5orf64Q2M2E5 130 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 ZNF260Q3ZCT1 412 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 IDNKQ5T6J7 187 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 MAFIPQ8WZ33 124 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 RBMXL1Q96E39 390 aaKnown RBP7.73□□□□□ -1.17
HDAC6-207ENST00000430858 YIPF6Q96EC8 236 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 RITA1Q96K30 269 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 HSPB9Q9BQS6 159 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 GINS4Q9BRT9 223 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 RHBDL2Q9NX52 303 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 RNF150Q9ULK6 438 aa7.73□□□□□ -1.17
HDAC6-207ENST00000430858 A0A0A6YYH2 397 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 A6NJ64 397 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 TRIM64CA6NLI5 447 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 H7C2Y5 167 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 WIPF1O43516 503 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 PROP1O75360 226 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 ELANEP08246 267 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 CTXN2P0C2S0 81 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 OR8U9P0C7N5 309 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 CNTFRP26992 372 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 GNG2P59768 71 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 RPL23AP62750 156 aaKnown RBP7.72□□□□□ -1.17
HDAC6-207ENST00000430858 FOXE3Q13461 319 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 CXorf66Q5JRM2 361 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-207ENST00000430858 SAMD5Q5TGI4 173 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 LIN54Q6MZP7 749 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 GLDNQ6ZMI3 551 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-207ENST00000430858 PDPNQ86YL7 162 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 WFDC9Q8NEX5 89 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 OR8U1Q8NH10 309 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 ST6GALNAC5Q9BVH7 336 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 OR2D2Q9H210 308 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 OR51J1Q9H342 316 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 ELF5Q9UKW6 265 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-207ENST00000430858 SPATA2Q9UM82 520 aa7.72□□□□□ -1.17
HDAC6-207ENST00000430858 RBM7Q9Y580 266 aaKnown RBP7.72□□□□□ -1.17
HDAC6-207ENST00000430858 IGKV1D-8A0A087WSZ0 117 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 IGHV7-81A0A0B4J1V7 117 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 TMEM235A6NFC5 223 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 G3V4G9 280 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 M0R1X1 148 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 RRHO14718 337 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 IGHG4P01861 327 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 APOA2P02652 100 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 CD33P20138 364 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 CFHR3Q02985 330 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 PDLIM3Q53GG5 364 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-207ENST00000430858 KPRPQ5T749 579 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-207ENST00000430858 C1QL4Q86Z23 238 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 H1FOOQ8IZA3 346 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-207ENST00000430858 RNF152Q8N8N0 203 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 ZNF383Q8NA42 475 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 DRAXINQ8NBI3 349 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-207ENST00000430858 OR5H6Q8NGV6 325 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 NUDCD2Q8WVJ2 157 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 SLC25A38Q96DW6 304 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 DIABLOQ9NR28 239 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 SDHAF2Q9NX18 166 aa7.71□□□□□ -1.18
HDAC6-207ENST00000430858 TRAV18A0A075B6X5 111 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 NUDT19A8MXV4 375 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 ATP6V0E1O15342 81 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 SPDEFO95238 335 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 IGKV1-16P04430 117 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 TGFBR1P36897 503 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 RPS19P39019 145 aaKnown RBP7.7□□□□□ -1.18
HDAC6-207ENST00000430858 RPS16P62249 146 aaKnown RBP7.7□□□□□ -1.18
HDAC6-207ENST00000430858 LSM3P62310 102 aaKnown RBP7.7□□□□□ -1.18
HDAC6-207ENST00000430858 TAGLNQ01995 201 aaKnown RBP7.7□□□□□ -1.18
HDAC6-207ENST00000430858 PLGLAQ15195 96 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 BEAN1Q3B7T3 259 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 ZNF660Q6AZW8 331 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-207ENST00000430858 CNIH2Q6PI25 160 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 ZNF695Q8IW36 515 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 KLHL30-AS1Q8NEE0 82 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 FLYWCH2Q96CP2 140 aaKnown RBP7.7□□□□□ -1.18
HDAC6-207ENST00000430858 TSNAXQ99598 290 aaKnown RBP7.7□□□□□ -1.18
HDAC6-207ENST00000430858 FBXL15Q9H469 300 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 SLC35D1Q9NTN3 355 aa7.7□□□□□ -1.18
HDAC6-207ENST00000430858 PKD1L1Q8TDX9 2849 aa7.69□□□□□ -1.18
HDAC6-207ENST00000430858 SSX5O60225 188 aa7.69□□□□□ -1.18
HDAC6-207ENST00000430858 DUS4LO95620 317 aaKnown RBP7.69□□□□□ -1.18
HDAC6-207ENST00000430858 RPLP1P05386 114 aaKnown RBP7.69□□□□□ -1.18
HDAC6-207ENST00000430858 RRASP10301 218 aa7.69□□□□□ -1.18
HDAC6-207ENST00000430858 PSMB8P28062 276 aa7.69□□□□□ -1.18
HDAC6-207ENST00000430858 PPIFP30405 207 aaKnown RBP7.69□□□□□ -1.18
HDAC6-207ENST00000430858 MYCNOSP40205 109 aa7.69□□□□□ -1.18
HDAC6-207ENST00000430858 CDX1P47902 265 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-207ENST00000430858 LGALS7P47929 136 aa7.69□□□□□ -1.18
HDAC6-207ENST00000430858 THBS3P49746 956 aa7.69□□□□□ -1.18
HDAC6-207ENST00000430858 CRIP2P52943 208 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms