RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TPPPO94811 219 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 BPNT1O95861 308 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 CA2P00918 260 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 CT45A6P0DMU7 189 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 CT45A5P0DMU8 189 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 CT45A7P0DMV0 189 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 MAP2K4P45985 399 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 KLF5Q13887 457 aaPredicted RBP9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 PSG5Q15238 335 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 HMGN3Q15651 99 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 FAM209BQ5JX69 171 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 XAF1Q6GPH4 301 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 PDPNQ86YL7 162 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 OR5T1Q8NG75 326 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 OR5AN1Q8NGI8 311 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 GRPEL2Q8TAA5 225 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 FAM46BQ96A09 425 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 ORAI1Q96D31 301 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 OR14A2Q96R54 314 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 PHB2Q99623 299 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 TMEM59Q9BXS4 323 aa9.41□□□□□ -0.9
HLA-DQB3-203ENST00000425319 TRAV8-7A0A075B6U6 113 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 MYL12BO14950 172 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 TPBGQ13641 420 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 RPL39P5Q59GN2 51 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 C19orf54Q5BKX5 351 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 GLDNQ6ZMI3 551 aaPredicted RBP9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 MS4A15Q8N5U1 240 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 OR13C5Q8NGS8 318 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 CENPOQ9BU64 300 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 IFI27L2Q9H2X8 130 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 GAR1Q9NY12 217 aaKnown RBP9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 SIGLEC8Q9NYZ4 499 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 FBXO7Q9Y3I1 522 aa9.4□□□□□ -0.9
HLA-DQB3-203ENST00000425319 TRBV5-7A0A0A0MS05 114 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 EFCAB10A6NFE3 127 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 MPPED1O15442 326 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ACTL6BO94805 426 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 CD1AP06126 327 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 EGR2P11161 476 aaPredicted RBP9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 CELP19835 753 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SYNJ2BPP57105 145 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ABHD14BQ96IU4 210 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SMPD3Q9NY59 655 aaPredicted RBP9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 COA4Q9NYJ1 87 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RBM7Q9Y580 266 aaKnown RBP9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 CEPT1Q9Y6K0 416 aa9.39□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RYR3Q15413 4870 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 PNMA8CA0A1B0GUJ8 204 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 CREBL2O60519 120 aaPredicted RBP9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 TUSC2O75896 110 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 OR2A4O95047 310 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RRASP10301 218 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SERPINB10P48595 397 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RPS27AP62979 156 aaKnown RBP9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 NDPQ00604 133 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ST3GAL4Q11206 333 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SIGIRRQ6IA17 410 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 C6orf201Q7Z4U5 140 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 HAPLN4Q86UW8 402 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 LAX1Q8IWV1 398 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RBMXL1Q96E39 390 aaKnown RBP9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 DERL3Q96Q80 235 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SULT4A1Q9BR01 284 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SLC35D1Q9NTN3 355 aa9.38□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SHOXO15266 292 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 BRI3O95415 125 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 HTR2CP28335 458 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SMN1Q16637 294 aaKnown RBP9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RTL8BQ17RB0 113 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 VMA21Q3ZAQ7 101 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ZFP41Q8N8Y5 198 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 DRAXINQ8NBI3 349 aaPredicted RBP9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 BVESQ8NE79 360 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 KCTD12Q96CX2 325 aaKnown RBP9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 TINAGL1Q9GZM7 467 aaPredicted RBP9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 C11orf54Q9H0W9 315 aaPredicted RBP9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 C8orf4Q9NR00 106 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 GAB2Q9UQC2 676 aa9.37□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SORL1Q92673 2214 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 M0R1X1 148 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 WNT4P56705 351 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 CD81P60033 236 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RPS11P62280 158 aaKnown RBP eCLIP9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ATP5G2Q06055 141 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ACSM3Q53FZ2 586 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 RBM48Q5RL73 367 aaKnown RBP9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 ZNF343Q6P1L6 599 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 SLC25A42Q86VD7 318 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 APH1BQ8WW43 257 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 CYGBQ8WWM9 190 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 PHYHIPQ92561 330 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 PTX4Q96A99 478 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 PGLYRP3Q96LB9 341 aa9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 CMSS1Q9BQ75 279 aaKnown RBP9.36□□□□□ -0.91
HLA-DQB3-203ENST00000425319 NEURL2Q9BR09 285 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms