RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 WIPI2Q9Y4P8 454 aa9.6□□□□□ -0.87
SEC61A1-202ENST00000424880 THADAQ6YHU6 1953 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 TRBV20OR9-2A0A075B6H5 130 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 IGKV1-6A0A0C4DH72 117 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 G3V3Y1 287 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 HS3ST1O14792 307 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 MMP23AO75900 390 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 SRP14P37108 136 aaKnown RBP9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 LCN2P80188 198 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 VAMP3Q15836 100 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 HLA-DRB5Q30154 266 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 KRTCAP3Q53RY4 240 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 C20orf204Q6ZNR8 217 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 PP6455Q8WZ26 134 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 TAF15Q92804 592 aaKnown RBP eCLIP9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 UCN2Q96RP3 112 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 TBL2Q9Y4P3 447 aaKnown RBP9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 C2CD4DB7Z1M9 353 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 NDUFS8O00217 210 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 FCN1O00602 326 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 CCNOP22674 350 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 AMTP48728 403 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 GNB1P62873 340 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 ZNF90Q03938 601 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 LRRC75BQ2VPJ9 315 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 SLC25A47Q6Q0C1 308 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 SIGLECL1Q8N7X8 197 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 ELOVL5Q9NYP7 299 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 HSPB7Q9UBY9 170 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 RBM7Q9Y580 266 aaKnown RBP9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 EML6Q6ZMW3 1958 aa9.59□□□□□ -0.87
SEC61A1-202ENST00000424880 IGFBP4P22692 258 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 CTRLP40313 264 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 Q8NFD4 153 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 OR1L1Q8NH94 360 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 ANAPC16Q96DE5 110 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 ATP23Q9Y6H3 246 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 CFAP47Q6ZTR5 3102 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 NRASP01111 189 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 LHX2P50458 406 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 GRB2P62993 217 aaKnown RBP9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 DAZAP2Q15038 168 aaPredicted RBP9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 PLCXD3Q63HM9 321 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 RDH5Q92781 318 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 ZNF488Q96MN9 340 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 CLN8Q9UBY8 286 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 ODAMA1E959 279 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 CD300LBA8K4G0 201 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 F6UZH7 168 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 WDR1O75083 606 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 PDCD6O75340 191 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 TNFP01375 233 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 IGKV1-39P01597 117 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 IGKV1D-39P04432 117 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 HOXC12P31275 282 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 TCL1AP56279 114 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 SLC38A11Q08AI6 406 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 WDR5BQ86VZ2 330 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 ZNF611Q8N823 705 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 OR4B1Q8NGF8 309 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 OR56B2PQ8NGI1 322 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 ABHD14BQ96IU4 210 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 LRFN3Q9BTN0 628 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 ALKBH4Q9NXW9 302 aa9.58□□□□□ -0.88
SEC61A1-202ENST00000424880 LOC102725191A0A1B0GVB3 256 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 AQP7P3A6NL99 342 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 NPIPA2E9PIF3 369 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 CCL2P13500 99 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 UCP1P25874 307 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 RIPPLY3P57055 190 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 ARF1P84077 181 aaKnown RBP9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 RELBQ01201 579 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 FAM53AQ6NSI3 398 aaPredicted RBP9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 CD207Q9UJ71 328 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 SNURFLB1AK76 121 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 KITLGP21583 273 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 SRPXP78539 464 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 WFDC8Q8IUA0 241 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 ZNF738Q8NE65 137 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 GJC3Q8NFK1 279 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 OR10G3Q8NGC4 313 aa9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 NEIL1Q96FI4 390 aaPredicted RBP9.57□□□□□ -0.88
SEC61A1-202ENST00000424880 IGHV2OR16-5A0A0B4J2B6 119 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 A0A1W2PQD3 144 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 GOSR1O95249 250 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 IGHV3-9P01782 118 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 IGLC2P0DOY2 106 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 IGLC3P0DOY3 106 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 F2RP25116 425 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 LINC00205P59089 165 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 FBLN7Q53RD9 439 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 SFRP2Q96HF1 295 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 UHRF2Q96PU4 802 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 GNB4Q9HAV0 340 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 GPR27Q9NS67 375 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 OR1A1Q9P1Q5 309 aa9.56□□□□□ -0.88
SEC61A1-202ENST00000424880 KCNS2Q9ULS6 477 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms