RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 AGMATQ9BSE5 352 aa16.63■□□□□ 0.25
PTPN4-202ENST00000420482 HDHD3Q9BSH5 251 aaPredicted RBP16.63■□□□□ 0.25
PTPN4-202ENST00000420482 PECRQ9BY49 303 aa16.63■□□□□ 0.25
PTPN4-202ENST00000420482 C11orf54Q9H0W9 315 aaPredicted RBP16.63■□□□□ 0.25
PTPN4-202ENST00000420482 FBXL15Q9H469 300 aa16.63■□□□□ 0.25
PTPN4-202ENST00000420482 RAB22AQ9UL26 194 aa16.63■□□□□ 0.25
PTPN4-202ENST00000420482 H0YJW9 148 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 APOA2P02652 100 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 GADD45AP24522 165 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 FABP5Q01469 135 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 TBCEQ15813 527 aaPredicted RBP16.62■□□□□ 0.25
PTPN4-202ENST00000420482 ECSCRQ19T08 205 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 ZNF367Q7RTV3 350 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 MINDY2Q8NBR6 621 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 OR5AN1Q8NGI8 311 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 PTX4Q96A99 478 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 TSNAXQ99598 290 aaKnown RBP16.62■□□□□ 0.25
PTPN4-202ENST00000420482 KLK15Q9H2R5 256 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.62■□□□□ 0.25
PTPN4-202ENST00000420482 OR1A1Q9P1Q5 309 aa16.62■□□□□ 0.25
PTPN4-202ENST00000420482 FOXA2Q9Y261 457 aaPredicted RBP16.62■□□□□ 0.25
PTPN4-202ENST00000420482 A0A1W2PN81 502 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 TRDCB7Z8K6 153 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 I3L521 148 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 SCTP09683 121 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 CD3GP09693 182 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 MYL9P24844 172 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 CHRNA7P36544 502 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 CRIP2P52943 208 aaPredicted RBP16.61■□□□□ 0.25
PTPN4-202ENST00000420482 TMEM50BP56557 158 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 CLDN12P56749 244 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 ZNF260Q3ZCT1 412 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 IZUMO2Q6UXV1 221 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 GLDNQ6ZMI3 551 aaPredicted RBP16.61■□□□□ 0.25
PTPN4-202ENST00000420482 OR4A4PQ8NGN8 299 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 CENPOQ9BU64 300 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 DNAH9Q9NYC9 4486 aa16.61■□□□□ 0.25
PTPN4-202ENST00000420482 FOXI3A8MTJ6 420 aaPredicted RBP16.6■□□□□ 0.25
PTPN4-202ENST00000420482 SPDEFO95238 335 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 TFAP2AP05549 437 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 ECI1P42126 302 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 CX3CL1P78423 397 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 PDPNQ86YL7 162 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.6■□□□□ 0.25
PTPN4-202ENST00000420482 RAB3CQ96E17 227 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 CNBD2Q96M20 576 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 PARP12Q9H0J9 701 aaKnown RBP16.6■□□□□ 0.25
PTPN4-202ENST00000420482 GNB4Q9HAV0 340 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 METTL1Q9UBP6 276 aaKnown RBP16.6■□□□□ 0.25
PTPN4-202ENST00000420482 TENM3Q9P273 2699 aa16.6■□□□□ 0.25
PTPN4-202ENST00000420482 TRAV1-2A0A0B4J238 106 aa16.59■□□□□ 0.25
PTPN4-202ENST00000420482 NHLRC4P0CG21 123 aaPredicted RBP16.59■□□□□ 0.25
PTPN4-202ENST00000420482 MAP2K4P45985 399 aa16.59■□□□□ 0.25
PTPN4-202ENST00000420482 CBX3Q13185 183 aa16.59■□□□□ 0.25
PTPN4-202ENST00000420482 HES5Q5TA89 166 aa16.59■□□□□ 0.25
PTPN4-202ENST00000420482 OR5B12Q96R08 314 aa16.59■□□□□ 0.25
PTPN4-202ENST00000420482 RDH8Q9NYR8 311 aa16.59■□□□□ 0.25
PTPN4-202ENST00000420482 A3GALT2U3KPV4 340 aa16.59■□□□□ 0.25
PTPN4-202ENST00000420482 TMEM272A0A1B0GTI8 110 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 RPS16P62249 146 aaKnown RBP16.58■□□□□ 0.24
PTPN4-202ENST00000420482 KIAA0141Q14154 515 aaPredicted RBP16.58■□□□□ 0.24
PTPN4-202ENST00000420482 AKIRIN2Q53H80 203 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 ACTBL2Q562R1 376 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 C11orf87Q6NUJ2 197 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 CD200R1LQ6Q8B3 271 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 ZNF562Q6V9R5 426 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 ZNF429Q86V71 674 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 PPP1R27Q86WC6 154 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 OR10J5Q8NHC4 309 aa16.58■□□□□ 0.24
PTPN4-202ENST00000420482 FLYWCH2Q96CP2 140 aaKnown RBP16.58■□□□□ 0.24
PTPN4-202ENST00000420482 ZNF256Q9Y2P7 627 aaPredicted RBP16.58■□□□□ 0.24
PTPN4-202ENST00000420482 METTL21EPA6NDL7 271 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 LDLRAD4O15165 306 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 FABP7O15540 132 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 DIRAS3O95661 229 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 ARL6IP1Q15041 203 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 PSG5Q15238 335 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 PLAC9Q5JTB6 97 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 UNQ5815/PRO19632Q6UWF5 114 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 DRAXINQ8NBI3 349 aaPredicted RBP16.57■□□□□ 0.24
PTPN4-202ENST00000420482 CLCC1Q96S66 551 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 SLA2Q9H6Q3 261 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 SCOCQ9UIL1 159 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 RAB26Q9ULW5 256 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 NUBP2Q9Y5Y2 271 aa16.57■□□□□ 0.24
PTPN4-202ENST00000420482 IFITM5A6NNB3 132 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 LINC01619G3V211 115 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 OVOL1O14753 267 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 BET1O15155 118 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 RAB3BP20337 219 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 RAB6AP20340 208 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 GALP22466 123 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 GNB1P62873 340 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 NDPQ00604 133 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 TAGLNQ01995 201 aaKnown RBP16.56■□□□□ 0.24
PTPN4-202ENST00000420482 OR10R2Q8NGX6 335 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 PRR25Q96S07 402 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 TOLLIPQ9H0E2 274 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 NDUFB11Q9NX14 153 aa16.56■□□□□ 0.24
PTPN4-202ENST00000420482 FBXO7Q9Y3I1 522 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms