RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 KRTAP1-3Q8IUG1 177 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 ABHD12Q8N2K0 398 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR13D1Q8NGV5 346 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 COQ8AQ8NI60 647 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 CD300LFQ8TDQ1 290 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 GLYATL2Q8WU03 294 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 ST6GALNAC6Q969X2 333 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 TMEM186Q96B77 213 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 MSI2Q96DH6 328 aaKnown RBP11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 ADTRPQ96IZ2 230 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 TMEM222Q9H0R3 208 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 SIRPDQ9H106 197 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 MED28Q9H204 178 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 HEXA-AS1Q9H8Q6 139 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 INSIG2Q9Y5U4 225 aa11.64□□□□□ -0.55
SHMT1P1-201ENST00000419974 IGHV2-26A0A0B4J1V2 119 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 HSD17B6O14756 317 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 ST8SIA5O15466 376 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 RBFOX2O43251 390 aaKnown RBP eCLIP11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR2A4O95047 310 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 NFYBP25208 207 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 GPR12P47775 334 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 PRRX1P54821 245 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 CBX3Q13185 183 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 PHLDA2Q53GA4 152 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 NCR3LG1Q68D85 454 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 FAM53AQ6NSI3 398 aaPredicted RBP11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 BTNL3Q6UXE8 466 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 NEURL2Q9BR09 285 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 CLEC7AQ9BXN2 247 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 BEX2Q9BXY8 128 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 NARFLQ9H6Q4 476 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 BEX1Q9HBH7 125 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 RAB18Q9NP72 206 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 LIN7CQ9NUP9 197 aaKnown RBP11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 FLNAP21333 2647 aaKnown RBP11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 NF1P21359 2839 aa11.63□□□□□ -0.55
SHMT1P1-201ENST00000419974 MEX3AA1L020 520 aaKnown RBP11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 FAM157AC9JC47 383 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 SLC31A2O15432 143 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 VAMP1P23763 118 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 DUTP33316 252 aaKnown RBP11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 DVL1P1P54792 670 aaPredicted RBP11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 CATR1Q13166 79 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 LTC4SQ16873 150 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 Q5PR19 223 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 LIAT1Q6ZQX7 453 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 LGI3Q8N145 548 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR52B4Q8NGK2 314 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 DDB2Q92466 427 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 C5orf30Q96GV9 206 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 S1PR3Q99500 378 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 PCGF1Q9BSM1 259 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 KIAA2026Q5HYC2 2103 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 ARID1AO14497 2285 aa11.62□□□□□ -0.55
SHMT1P1-201ENST00000419974 hCG_2014768A0A024R1R8 64 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 TRAV20A0A0B4J274 112 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 ODF3BA8MYP8 253 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 TXNL1O43396 289 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 SSNA1O43805 119 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 MSMBP08118 114 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR5AC1P0C628 307 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 SAA2P0DJI9 122 aaPredicted RBP11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 ARF6P62330 175 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 LCN2P80188 198 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 HLA-DRB5Q30154 266 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 ANKRD55Q3KP44 614 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 UTF1Q5T230 341 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 HCP5Q6MZN7 132 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 WFDC11Q8NEX6 87 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR11H7Q8NGC8 314 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 ABHD14BQ96IU4 210 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 C18orf12Q96KH6 178 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 TP53RKQ96S44 253 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 ONECUT1Q9UBC0 465 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 KCNS2Q9ULS6 477 aa11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 AMMECR1Q9Y4X0 333 aaPredicted RBP11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 NIPBLQ6KC79 2804 aaeCLIP11.61□□□□□ -0.55
SHMT1P1-201ENST00000419974 LY6LH3BQJ8 138 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 IL3RAP26951 378 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 KIR2DS2P43631 304 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 THBS3P49746 956 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 FCN2Q15485 313 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 TCTE3Q8IZS6 198 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 OR5M8Q8NGP6 311 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 LEAP2Q969E1 77 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 MMP26Q9NRE1 261 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 RNF150Q9ULK6 438 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 TMED3Q9Y3Q3 217 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 OOSP1A8MZH6 123 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 BUB1B-PAK6H3BSN5 160 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 J3QLI3 93 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 TOR1AO14656 332 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 SLC25A6P12236 298 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 UBE2E1P51965 193 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 ARHGDIBP52566 201 aa11.6□□□□□ -0.55
SHMT1P1-201ENST00000419974 BRWD1-AS2P59051 145 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms