RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 FSHBP01225 129 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 THBS3P49746 956 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF134P52741 427 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF816Q0VGE8 651 aaPredicted RBP6.86□□□□□ -1.31
TRIM48-201ENST00000417545 BAMBIQ13145 260 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 LRRC75BQ2VPJ9 315 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 DEFB112Q30KQ8 113 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 RPL39P5Q59GN2 51 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 UTF1Q5T230 341 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 AADACL3Q5VUY0 350 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 FAM71F2Q6NXP2 309 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 C11orf88Q6PI97 169 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 DHRS11Q6UWP2 260 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 KCTD9Q7L273 389 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 SLC38A6Q8IZM9 456 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 ZBTB34Q8NCN2 500 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 TERB2Q8NHR7 220 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 TCTEX1D2Q8WW35 142 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 RTN4IP1Q8WWV3 396 aaPredicted RBP6.86□□□□□ -1.31
TRIM48-201ENST00000417545 ADTRPQ96IZ2 230 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 JMJD8Q96S16 334 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 SDHCQ99643 169 aaPredicted RBP6.86□□□□□ -1.31
TRIM48-201ENST00000417545 DPAGT1Q9H3H5 408 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 CCL28Q9NRJ3 127 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 TNFRSF19Q9NS68 423 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 COPZ2Q9P299 210 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 PRELID3BQ9Y3B1 194 aa6.86□□□□□ -1.31
TRIM48-201ENST00000417545 IGKV1D-13A0A0B4J2D9 117 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 IGHV1-3A0A0C4DH29 117 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 MDFIC2A0A1B0GVS7 189 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 FAM240BA0A1B0GVZ2 78 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 OR5H14A6NHG9 310 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 H3BUX3 64 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 TNFSF12O43508 249 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 IFNA2P01563 188 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 RLN1P04808 185 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 FAM157CP0CG43 387 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 IGKV1-13P0DP09 117 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 RAB13P51153 203 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 RBMS2Q15434 407 aaKnown RBP6.85□□□□□ -1.31
TRIM48-201ENST00000417545 RTL8BQ17RB0 113 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 PHLDA2Q53GA4 152 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 C9orf139Q6ZV77 190 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 TMED4Q7Z7H5 227 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 BCL6BQ8N143 479 aaPredicted RBP6.85□□□□□ -1.31
TRIM48-201ENST00000417545 DRAM1Q8N682 238 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 SIGLECL1Q8N7X8 197 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 MARCH1Q8TCQ1 289 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 AKR1E2Q96JD6 320 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 HSD17B10Q99714 261 aaKnown RBP6.85□□□□□ -1.31
TRIM48-201ENST00000417545 SSX3Q99909 188 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 MRPL20Q9BYC9 149 aaKnown RBP6.85□□□□□ -1.31
TRIM48-201ENST00000417545 SDHAF2Q9NX18 166 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 SLC2A8Q9NY64 477 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 PITPNC1Q9UKF7 332 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 TEX15Q9BXT5 2789 aa6.85□□□□□ -1.31
TRIM48-201ENST00000417545 IGHV3-72A0A0B4J1Y9 119 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 TEX13DA0A0J9YY54 714 aaPredicted RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 TIMM23O14925 209 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 WIPF1O43516 503 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 CRLF1O75462 422 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 FAM106CPP0CH98 169 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 TMEM11P17152 192 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 PAX6P26367 422 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 MC5RP33032 325 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 KIR2DS2P43631 304 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF137PP52743 207 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 UCP3P55916 312 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 TAGLNQ01995 201 aaKnown RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 DCTN2Q13561 401 aaKnown RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 SURF2Q15527 256 aaPredicted RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 LY6EQ16553 131 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 ARSJQ5FYB0 599 aaPredicted RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 OR2B11Q5JQS5 317 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 GLDNQ6ZMI3 551 aaPredicted RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF66Q6ZN08 573 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF818PQ6ZRF7 136 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF833PQ6ZTB9 187 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 DRAXINQ8NBI3 349 aaPredicted RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 OR13C8Q8NGS7 320 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 OR51H1Q8NH63 302 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 OR5R1Q8NH85 324 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 SSMEM1Q8WWF3 244 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 ZNF486Q96H40 463 aaPredicted RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 SLC25A21Q9BQT8 299 aaPredicted RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 SLC35D1Q9NTN3 355 aa6.84□□□□□ -1.31
TRIM48-201ENST00000417545 LIN7CQ9NUP9 197 aaKnown RBP6.84□□□□□ -1.31
TRIM48-201ENST00000417545 TCF21O43680 179 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 IGKV1D-33P01593 117 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 IGKV1-33P01594 117 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.32
TRIM48-201ENST00000417545 SNRNP70P08621 437 aaKnown RBP6.84□□□□□ -1.32
TRIM48-201ENST00000417545 ZNF735P0CB33 412 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 RRASP10301 218 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 AKR1C4P17516 323 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 PI3P19957 117 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 CCR6P51684 374 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 PIGPP57054 158 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 TAS2R31P59538 309 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 ASAH1Q13510 395 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms