RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 IGHG4P01861 327 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 GSTP1P09211 210 aaKnown RBP12.25□□□□□ -0.45
ITGB1-204ENST00000417122 GSTT2P0CG29 244 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 GSTT2BP0CG30 244 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 OR5H8P0DN80 308 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 MYCNOSP40205 109 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 ARFRP1Q13795 201 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 NEDD8Q15843 81 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 KCTD21Q4G0X4 260 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 IGSF11Q5DX21 431 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 FOXB2Q5VYV0 432 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 LIN54Q6MZP7 749 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 LCNL1Q6ZST4 164 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 MRPL41Q8IXM3 137 aaKnown RBP12.25□□□□□ -0.45
ITGB1-204ENST00000417122 RNF152Q8N8N0 203 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 DRAXINQ8NBI3 349 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-204ENST00000417122 OR5AN1Q8NGI8 311 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 MAFIPQ8WZ33 124 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 CHCHD6Q9BRQ6 235 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 CABLES2Q9BTV7 478 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 OR51J1Q9H342 316 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 ZNF230Q9UIE0 474 aaPredicted RBP12.25□□□□□ -0.45
ITGB1-204ENST00000417122 DAPK2Q9UIK4 370 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 WASHC3Q9Y3C0 194 aa12.25□□□□□ -0.45
ITGB1-204ENST00000417122 RRHO14718 337 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 ATP6V0E1O15342 81 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 RBBP9O75884 186 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 DUS4LO95620 317 aaKnown RBP12.24□□□□□ -0.45
ITGB1-204ENST00000417122 SDC2P34741 201 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 TALDO1P37837 337 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 ARL6IP1Q15041 203 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 SFXN4Q6P4A7 337 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 OR10J5Q8NHC4 309 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 RNF5Q99942 180 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 FBXL15Q9H469 300 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 PARP11Q9NR21 331 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 WSB1Q9Y6I7 421 aa12.24□□□□□ -0.45
ITGB1-204ENST00000417122 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 G3V318 75 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 DIRAS3O95661 229 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 TFAP2AP05549 437 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 SNRPBP14678 240 aaKnown RBP12.23□□□□□ -0.45
ITGB1-204ENST00000417122 CD36P16671 472 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 PSMB8P28062 276 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 PPIFP30405 207 aaKnown RBP12.23□□□□□ -0.45
ITGB1-204ENST00000417122 CDX1P47902 265 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-204ENST00000417122 PLGLAQ15195 96 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 SRSF7Q16629 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
ITGB1-204ENST00000417122 CDNFQ49AH0 187 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-204ENST00000417122 P2RX4Q99571 388 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 RNF167Q9H6Y7 350 aa12.23□□□□□ -0.45
ITGB1-204ENST00000417122 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.23□□□□□ -0.45
ITGB1-204ENST00000417122 AURKAIP1Q9NWT8 199 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-204ENST00000417122 ELF5Q9UKW6 265 aaPredicted RBP12.23□□□□□ -0.45
ITGB1-204ENST00000417122 LOC100506127A0A0U1RQW1 187 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 M0R1X1 148 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 CLEC2LP0C7M8 214 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 OR8U9P0C7N5 309 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 LINC00205P59089 165 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 MXD1Q05195 221 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 Q6ZS49 121 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 ZNF383Q8NA42 475 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 OR8U1Q8NH10 309 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 LGALS14Q8TCE9 139 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 RAX2Q96IS3 184 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 DUX3Q96PT4 197 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 CENPOQ9BU64 300 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 OR2D2Q9H210 308 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 GAB2Q9UQC2 676 aa12.22□□□□□ -0.45
ITGB1-204ENST00000417122 TRAV41A0A0B4J266 112 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 CCL24O00175 119 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 SCGNO76038 276 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 APOA2P02652 100 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 IGKV1-16P04430 117 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 DTYMKP23919 212 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 RPS16P62249 146 aaKnown RBP12.21□□□□□ -0.45
ITGB1-204ENST00000417122 HACD4Q5VWC8 232 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 ZNF660Q6AZW8 331 aaPredicted RBP12.21□□□□□ -0.45
ITGB1-204ENST00000417122 TMEM65Q6PI78 240 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 PDPNQ86YL7 162 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 MRAPQ8TCY5 172 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 GINS4Q9BRT9 223 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 GPR61Q9BZJ8 451 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 SDHAF2Q9NX18 166 aa12.21□□□□□ -0.45
ITGB1-204ENST00000417122 METTL1Q9UBP6 276 aaKnown RBP12.21□□□□□ -0.45
ITGB1-204ENST00000417122 RBM7Q9Y580 266 aaKnown RBP12.21□□□□□ -0.45
ITGB1-204ENST00000417122 PRKDCP78527 4128 aaKnown RBP12.21□□□□□ -0.45
ITGB1-204ENST00000417122 IGKV1D-8A0A087WSZ0 117 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 FCN1O00602 326 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 IGLV1-40P01703 118 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 CX3CL1P78423 397 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 NDPQ00604 133 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 PSG5Q15238 335 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 ECSCRQ19T08 205 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 DEFB136Q30KP8 78 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 MYOZ3Q8TDC0 251 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
ITGB1-204ENST00000417122 FLYWCH2Q96CP2 140 aaKnown RBP12.2□□□□□ -0.46
ITGB1-204ENST00000417122 CLCC1Q96S66 551 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms