RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 GFI1Q99684 422 aa16.86■□□□□ 0.29
ACTB-203ENST00000417101 GHITMQ9H3K2 345 aa16.86■□□□□ 0.29
ACTB-203ENST00000417101 GAB2Q9UQC2 676 aa16.86■□□□□ 0.29
ACTB-203ENST00000417101 SMAD5-AS1Q9Y6J3 95 aa16.86■□□□□ 0.29
ACTB-203ENST00000417101 LINC01619G3V211 115 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 SAP30O75446 220 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 LGALS1P09382 135 aaKnown RBP16.85■□□□□ 0.29
ACTB-203ENST00000417101 ARSBP15848 533 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 ZBTB25P24278 435 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 TMEM267Q0VDI3 215 aaPredicted RBP16.85■□□□□ 0.29
ACTB-203ENST00000417101 IRF3Q14653 427 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 PPP1R27Q86WC6 154 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 FAM89BQ8N5H3 189 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 DRAXINQ8NBI3 349 aaPredicted RBP16.85■□□□□ 0.29
ACTB-203ENST00000417101 EDARADDQ8WWZ3 215 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 FAM103A1Q9BTL3 118 aaKnown RBP16.85■□□□□ 0.29
ACTB-203ENST00000417101 METTL1Q9UBP6 276 aaKnown RBP16.85■□□□□ 0.29
ACTB-203ENST00000417101 RNF150Q9ULK6 438 aa16.85■□□□□ 0.29
ACTB-203ENST00000417101 AK6Q9Y3D8 172 aaKnown RBP16.85■□□□□ 0.29
ACTB-203ENST00000417101 IGHV4OR15-8A0A075B7B6 117 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 A0A087WW49 117 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 SLC17A2O00624 439 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 SCTP09683 121 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 SNRPBP14678 240 aaKnown RBP16.84■□□□□ 0.29
ACTB-203ENST00000417101 PSG5Q15238 335 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 ACTBL2Q562R1 376 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 CD200R1LQ6Q8B3 271 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 UNQ5815/PRO19632Q6UWF5 114 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 TMEM91Q6ZNR0 172 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 RNF5Q99942 180 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 Q9N2K0 584 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 C12orf4Q9NQ89 552 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 HSF4Q9ULV5 492 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 MGAT4AQ9UM21 535 aa16.84■□□□□ 0.29
ACTB-203ENST00000417101 FOXI3A8MTJ6 420 aaPredicted RBP16.83■□□□□ 0.28
ACTB-203ENST00000417101 PROP1O75360 226 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 IGHV3-11P01762 117 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 HSMCR30P0CW71 290 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 CPEP16870 476 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 VEGFCP49767 419 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 TMEM50BP56557 158 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 LINC00205P59089 165 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 RPS25P62851 125 aaKnown RBP16.83■□□□□ 0.28
ACTB-203ENST00000417101 RAB11BQ15907 218 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 PYHIN1Q6K0P9 492 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 ARHGAP5-AS1Q96IT6 56 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 MS4A10Q96PG2 267 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 TPSG1Q9NRR2 321 aa16.83■□□□□ 0.28
ACTB-203ENST00000417101 TPBGQ13641 420 aa16.82■□□□□ 0.28
ACTB-203ENST00000417101 AKIRIN2Q53H80 203 aa16.82■□□□□ 0.28
ACTB-203ENST00000417101 ZNF562Q6V9R5 426 aa16.82■□□□□ 0.28
ACTB-203ENST00000417101 LFNGQ8NES3 379 aa16.82■□□□□ 0.28
ACTB-203ENST00000417101 ARPC1AQ92747 370 aa16.82■□□□□ 0.28
ACTB-203ENST00000417101 PTX4Q96A99 478 aa16.82■□□□□ 0.28
ACTB-203ENST00000417101 CMSS1Q9BQ75 279 aaKnown RBP16.82■□□□□ 0.28
ACTB-203ENST00000417101 PECRQ9BY49 303 aa16.82■□□□□ 0.28
ACTB-203ENST00000417101 ZNF221Q9UK13 617 aa16.82■□□□□ 0.28
ACTB-203ENST00000417101 IGKV1-6A0A0C4DH72 117 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 ANKRD65E5RJM6 399 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 ARL6IP5O75915 188 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 CA2P00918 260 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 IGKV1-16P04430 117 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 SPNP16150 400 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 CLDN12P56749 244 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 TPPP2P59282 170 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 RPS16P62249 146 aaKnown RBP16.81■□□□□ 0.28
ACTB-203ENST00000417101 ACSM6Q6P461 480 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 ZNF383Q8NA42 475 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 TSNAXQ99598 290 aaKnown RBP16.81■□□□□ 0.28
ACTB-203ENST00000417101 NKX1-2Q9UD57 310 aaPredicted RBP16.81■□□□□ 0.28
ACTB-203ENST00000417101 TPRKBQ9Y3C4 175 aa16.81■□□□□ 0.28
ACTB-203ENST00000417101 CD40LGP29965 261 aa16.8■□□□□ 0.28
ACTB-203ENST00000417101 TRAM1Q15629 374 aa16.8■□□□□ 0.28
ACTB-203ENST00000417101 DUSP21Q9H596 190 aa16.8■□□□□ 0.28
ACTB-203ENST00000417101 SPDEFO95238 335 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 APOA2P02652 100 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 HSPB1P04792 205 aaKnown RBP16.79■□□□□ 0.28
ACTB-203ENST00000417101 TFAP2AP05549 437 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 CALRP27797 417 aaKnown RBP16.79■□□□□ 0.28
ACTB-203ENST00000417101 AQP4P55087 323 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 PLAC9Q5JTB6 97 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 OVCH2Q7RTZ1 564 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 SBSPONQ8IVN8 264 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 OR56B1Q8NGI3 324 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 OR6Q1Q8NGQ2 317 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 GRPEL2Q8TAA5 225 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 FAM3DQ96BQ1 224 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 FLYWCH2Q96CP2 140 aaKnown RBP16.79■□□□□ 0.28
ACTB-203ENST00000417101 SLA2Q9H6Q3 261 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 RDH8Q9NYR8 311 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 DNAH7Q8WXX0 4024 aa16.79■□□□□ 0.28
ACTB-203ENST00000417101 TRDCB7Z8K6 153 aa16.78■□□□□ 0.28
ACTB-203ENST00000417101 M0R1X1 148 aa16.78■□□□□ 0.28
ACTB-203ENST00000417101 RGS10O43665 173 aa16.78■□□□□ 0.28
ACTB-203ENST00000417101 SLC25A17O43808 307 aa16.78■□□□□ 0.28
ACTB-203ENST00000417101 TRGV3P03979 118 aa16.78■□□□□ 0.28
ACTB-203ENST00000417101 OR8U9P0C7N5 309 aa16.78■□□□□ 0.28
ACTB-203ENST00000417101 GP9P14770 177 aa16.78■□□□□ 0.28
ACTB-203ENST00000417101 PSMA1P25786 263 aaKnown RBP16.78■□□□□ 0.28
ACTB-203ENST00000417101 PITPNAQ00169 270 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms