RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.41
NCKIPSD-204ENST00000416649 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
NCKIPSD-204ENST00000416649 LAMTOR5O43504 91 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 NXPH2O95156 264 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 NAPSAO96009 420 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 FBLP22087 321 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 NPPCP23582 126 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 VHLLQ6RSH7 139 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 SGCZQ96LD1 299 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 FBXL7Q9UJT9 491 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 CACNA1DQ01668 2161 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 A0A1W2PQM1 296 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 CLEC18AA5D8T8 446 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 CLDN1O95832 211 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 IGLV3-1P01715 115 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 PATE4P0C8F1 98 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 PMCHP20382 165 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 LINC00310P59036 64 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 PHYHD1Q5SRE7 291 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 PLCXD3Q63HM9 321 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 TMEM211Q6ICI0 200 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 ZNF114Q8NC26 417 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 CLEC18CQ8NCF0 446 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 IL1F10Q8WWZ1 152 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 SPTSSAQ969W0 71 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 ZNF501Q96CX3 271 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 MDFIC2A0A1B0GVS7 189 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 KITLGP21583 273 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 F2RP25116 425 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 ZNF90Q03938 601 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 OR5D13Q8NGL4 314 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 PARD6GQ9BYG4 376 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 ELOVL5Q9NYP7 299 aa12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 ERRFI1Q9UJM3 462 aaPredicted RBP12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 YLPM1P49750 1951 aaKnown RBP12.51□□□□□ -0.41
NCKIPSD-204ENST00000416649 IGKV3D-11A0A0A0MRZ8 115 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 SPINK4O60575 86 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 RBM11P57052 281 aaKnown RBP12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 UBE2V1Q13404 147 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 PRAMEF20Q5VT98 475 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 ADPRHL1Q8NDY3 354 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 OR4B1Q8NGF8 309 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 MRPL18Q9H0U6 180 aaKnown RBP12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 ZNF703Q9H7S9 590 aaPredicted RBP12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 RBM7Q9Y580 266 aaKnown RBP12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 BOD1L1Q8NFC6 3051 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 CTXND1A0A1B0GTU2 59 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 KIAA1324LA8MWY0 1029 aaPredicted RBP12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 S100GP29377 79 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 ZNF586Q9NXT0 402 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 UQCR10Q9UDW1 63 aa12.5□□□□□ -0.41
NCKIPSD-204ENST00000416649 H0Y980 276 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 WNT2P09544 360 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 ATP5G3P48201 142 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 PRDX4Q13162 271 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 ZNF837Q96EG3 531 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 OXGR1Q96P68 337 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 FCN1O00602 326 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 RBFOX2O43251 390 aaKnown RBP eCLIP12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 EPHA8P29322 1005 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 AMTP48728 403 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 COMPP49747 757 aaPredicted RBP12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 LHFPL2Q6ZUX7 228 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 ZNF738Q8NE65 137 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 UBALD1Q8TB05 177 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 ORAOV1Q8WV07 137 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 PPP1R3CQ9UQK1 317 aa12.49□□□□□ -0.41
NCKIPSD-204ENST00000416649 LOC102725191A0A1B0GVB3 256 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 HYPMO75409 117 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 CBR3O75828 277 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 VENTXO95231 258 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 FRMD6-AS1P0C7T7 363 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 IER3P46695 156 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 VAMP3Q15836 100 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 TRIM61Q5EBN2 209 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 TMEM144Q7Z5S9 345 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 SAXO1Q8IYX7 474 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 ZNF611Q8N823 705 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 PLSCR2Q9NRY7 297 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 LOC105371242A0A075B767 164 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 F6UZH7 168 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 SLC17A3O00476 420 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 OR8B8Q15620 311 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 UBALD2Q8IYN6 164 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 AGBL5Q8NDL9 886 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 OR2M3Q8NG83 312 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 SFRP2Q96HF1 295 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 IL36RNQ9UBH0 155 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 SLC45A2Q9UMX9 530 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 TBL2Q9Y4P3 447 aaKnown RBP12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 RP1L1Q8IWN7 2480 aaPredicted RBP12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 HS3ST1O14792 307 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 CTSSP25774 331 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 LHX2P50458 406 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 GNB1P62873 340 aa12.48□□□□□ -0.41
NCKIPSD-204ENST00000416649 KCNMB1Q16558 191 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms