RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 A0A1W2PPH5 198 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 K7N7A8 449 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 DUS4LO95620 317 aaKnown RBP12.89□□□□□ -0.35
SHMT2-202ENST00000414700 AKR1C3P42330 323 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 LPAR6P43657 344 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
SHMT2-202ENST00000414700 EIF5AL1Q6IS14 154 aaKnown RBP12.89□□□□□ -0.35
SHMT2-202ENST00000414700 BTNL8Q6UX41 500 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 ZNF497Q6ZNH5 498 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 STX12Q86Y82 276 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 CHODLQ9H9P2 273 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 CTSZQ9UBR2 303 aa12.89□□□□□ -0.35
SHMT2-202ENST00000414700 DBX1A6NMT0 343 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 MED6O75586 246 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 TK1P04183 234 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 LYL1P12980 280 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 GLIPR1P48060 266 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 CASTOR1Q8WTX7 329 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 RSRP1Q9BUV0 290 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 ZNF665Q9H7R5 613 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 ANAPC10Q9UM13 185 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 C13orf42A0A1B0GVH6 325 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 C9JQL5 133 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 ADAM20O43506 726 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 CSN2P05814 226 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 VAMP1P23763 118 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 ZNF124Q15973 351 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 AWAT1Q58HT5 328 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 KRBOX4Q5JUW0 171 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 HOGA1Q86XE5 327 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 MRGPRFQ96AM1 343 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 PERPQ96FX8 193 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 AKR1E2Q96JD6 320 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 SNX22Q96L94 193 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 AQP10Q96PS8 301 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 DCTN5Q9BTE1 182 aa12.88□□□□□ -0.35
SHMT2-202ENST00000414700 PDZD2O15018 2839 aa12.87□□□□□ -0.35
SHMT2-202ENST00000414700 GPR37O15354 613 aa12.87□□□□□ -0.35
SHMT2-202ENST00000414700 RD3LP0DJH9 198 aa12.87□□□□□ -0.35
SHMT2-202ENST00000414700 HRH1P35367 487 aa12.87□□□□□ -0.35
SHMT2-202ENST00000414700 MDH2P40926 338 aaKnown RBP12.87□□□□□ -0.35
SHMT2-202ENST00000414700 PRSS54Q6PEW0 395 aa12.87□□□□□ -0.35
SHMT2-202ENST00000414700 PEG10Q86TG7 708 aaKnown RBP12.87□□□□□ -0.35
SHMT2-202ENST00000414700 GAPTQ8N292 157 aa12.87□□□□□ -0.35
SHMT2-202ENST00000414700 PARP11Q9NR21 331 aa12.87□□□□□ -0.35
SHMT2-202ENST00000414700 YLPM1P49750 1951 aaKnown RBP12.87□□□□□ -0.35
SHMT2-202ENST00000414700 hCG_1809904A0A1W2PP81 198 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 A0A1W2PR64 198 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 A0A1W2PRV1 198 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 C7orf77A4D0Y5 90 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 CEACAM18A8MTB9 384 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 H0YIZ8 118 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 DTYMKP23919 212 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 SULT1A2P50226 295 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 ATP5J2P56134 94 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 TAS2R31P59538 309 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 C1QL4Q86Z23 238 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 UBALD1Q8TB05 177 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 Q9N2K0 584 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 CCDC168Q8NDH2 2452 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 IFNA17P01571 189 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 PMP2P02689 132 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 SNRNP70P08621 437 aaKnown RBP12.86□□□□□ -0.35
SHMT2-202ENST00000414700 EDDM3BP56851 147 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 TMEM33P57088 247 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 ZNF469Q96JG9 3925 aaPredicted RBP12.86□□□□□ -0.35
SHMT2-202ENST00000414700 CELSR1Q9NYQ6 3014 aa12.86□□□□□ -0.35
SHMT2-202ENST00000414700 NKX6-3A6NJ46 265 aa12.85□□□□□ -0.35
SHMT2-202ENST00000414700 MGST3O14880 152 aa12.85□□□□□ -0.35
SHMT2-202ENST00000414700 SLC35E4Q6ICL7 350 aa12.85□□□□□ -0.35
SHMT2-202ENST00000414700 ADAD2Q8NCV1 583 aaKnown RBP12.85□□□□□ -0.35
SHMT2-202ENST00000414700 RAB1CQ92928 201 aa12.85□□□□□ -0.35
SHMT2-202ENST00000414700 BPESC1Q9GZL8 116 aa12.85□□□□□ -0.35
SHMT2-202ENST00000414700 SLC5A7Q9GZV3 580 aa12.85□□□□□ -0.35
SHMT2-202ENST00000414700 OR2S2Q9NQN1 319 aa12.85□□□□□ -0.35
SHMT2-202ENST00000414700 SLC25A10Q9UBX3 287 aaPredicted RBP12.85□□□□□ -0.35
SHMT2-202ENST00000414700 TRAPPC2LQ9UL33 140 aa12.85□□□□□ -0.35
SHMT2-202ENST00000414700 SDCBPO00560 298 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-202ENST00000414700 DVL1O14640 695 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 TAAR5O14804 337 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 AGPAT2O15120 278 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 FSTL3O95633 263 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 HOXB5P09067 269 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 SCTP09683 121 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 AKR1C4P17516 323 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 HOXA5P20719 270 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 GPR6P46095 362 aaPredicted RBP12.84□□□□□ -0.35
SHMT2-202ENST00000414700 ZNF880Q6PDB4 577 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 PRR18Q8N4B5 295 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 OR13A1Q8NGR1 328 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 SECTM1Q8WVN6 248 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 ISOC2Q96AB3 205 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 TIMD4Q96H15 378 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 KAAG1Q9UBP8 84 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 ANXA10Q9UJ72 324 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 WNK2Q9Y3S1 2297 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 ZANQ9Y493 2812 aa12.84□□□□□ -0.35
SHMT2-202ENST00000414700 TRBV6-6A0A0A6YYG2 114 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms