RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 MPTX1A8MV57 137 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 FAM157AC9JC47 383 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 G3V3Q6 166 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 SMLR1H3BR10 107 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 J3QR06 171 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 M0R1X1 148 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 RAB29O14966 203 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 PROP1O75360 226 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 CDS2O95674 445 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 C1QBP02746 253 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 SLC25A16P16260 332 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 DNASE1P24855 282 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 DUTP33316 252 aaKnown RBP5.43□□□□□ -1.54
VPS41-204ENST00000413141 DLX1P56177 255 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 RAP2BP61225 183 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 RPL30P62888 115 aaKnown RBP5.43□□□□□ -1.54
VPS41-204ENST00000413141 LCN2P80188 198 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 SRSF4Q08170 494 aaKnown RBP5.43□□□□□ -1.54
VPS41-204ENST00000413141 CLEC12BQ2HXU8 276 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 ZFP69Q49AA0 526 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 TMEM268Q5VZI3 342 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 GGNBP1Q5YKI7 109 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 GSG1LQ6UXU4 331 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 ZNF66Q6ZN08 573 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 C1orf229Q6ZS94 237 aaPredicted RBP5.43□□□□□ -1.54
VPS41-204ENST00000413141 LYG1Q8N1E2 194 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 LRRC75A-AS1Q8N1F1 130 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 Q8N7P7 452 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 SLC35G3Q8N808 338 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 OR2T35Q8NGX2 323 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 OR9G1Q8NH87 305 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 TCTEX1D2Q8WW35 142 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 TNFRSF14Q92956 283 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 RBPMSQ93062 196 aaKnown RBP5.43□□□□□ -1.54
VPS41-204ENST00000413141 IL22RA2Q969J5 263 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 WDR89Q96FK6 387 aaPredicted RBP5.43□□□□□ -1.54
VPS41-204ENST00000413141 ZNF251Q9BRH9 671 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 PDCD10Q9BUL8 212 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 GAB2Q9UQC2 676 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 AKAP6Q13023 2319 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 CSMD2Q7Z408 3487 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 DOPEY2Q9Y3R5 2298 aa5.43□□□□□ -1.54
VPS41-204ENST00000413141 PTPN13Q12923 2485 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 CENPEQ02224 2701 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 TACC2O95359 2948 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 CRYBG3Q68DQ2 2970 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 A0A096LNT2 108 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 C13orf42A0A1B0GVH6 325 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 C5orf51A6NDU8 294 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 FAM25EA8MYX2 175 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 RAMP3O60896 148 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 FOXH1O75593 365 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 IGKV1-39P01597 117 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 IGLV1-47P01700 117 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 IGKV1D-39P04432 117 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 SERPINE2P07093 398 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 HOXB5P09067 269 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 ZNF16P17020 682 aaPredicted RBP5.42□□□□□ -1.54
VPS41-204ENST00000413141 COX7A1P24310 79 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 EIF2B2P49770 351 aaKnown RBP5.42□□□□□ -1.54
VPS41-204ENST00000413141 ZNF137PP52743 207 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 BRWD1-AS2P59051 145 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 ARF6P62330 175 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 PRB3Q04118 309 aaPredicted RBP5.42□□□□□ -1.54
VPS41-204ENST00000413141 HLA-DRB5Q30154 266 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 ZNF585BQ52M93 769 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 OR2B11Q5JQS5 317 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 FAM71F2Q6NXP2 309 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 ZNF833PQ6ZTB9 187 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 LYZL2Q7Z4W2 148 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 ZNF695Q8IW36 515 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 SELENOHQ8IZQ5 122 aaKnown RBP5.42□□□□□ -1.54
VPS41-204ENST00000413141 ABHD12Q8N2K0 398 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 TCTEX1D1Q8N7M0 179 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 DRAXINQ8NBI3 349 aaPredicted RBP5.42□□□□□ -1.54
VPS41-204ENST00000413141 BEND2Q8NDZ0 799 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 OR10X1Q8NGY0 326 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 DDB2Q92466 427 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 MBD6Q96DN6 1003 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 OR10C1Q96KK4 312 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 S1PR3Q99500 378 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 CLEC7AQ9BXN2 247 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 NMES1Q9C002 83 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 SIRPDQ9H106 197 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 METTL8Q9H825 291 aaKnown RBP5.42□□□□□ -1.54
VPS41-204ENST00000413141 SIRT7Q9NRC8 400 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 FAM212BQ9NTI7 297 aaPredicted RBP5.42□□□□□ -1.54
VPS41-204ENST00000413141 POLR3KQ9Y2Y1 108 aaPredicted RBP5.42□□□□□ -1.54
VPS41-204ENST00000413141 TMED3Q9Y3Q3 217 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 KPTNQ9Y664 436 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 MALRD1Q5VYJ5 2156 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 ABCA2Q9BZC7 2435 aa5.42□□□□□ -1.54
VPS41-204ENST00000413141 ANKRD17O75179 2603 aaKnown RBP5.41□□□□□ -1.54
VPS41-204ENST00000413141 TRAV14DV4A0A0A6YYC5 116 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 PIGBOS1A0A0B4J2F0 54 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 A0A0G2JRQ6 117 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 TOR1AO14656 332 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 RBFOX2O43251 390 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS41-204ENST00000413141 S1PR2O95136 353 aa5.41□□□□□ -1.54
VPS41-204ENST00000413141 IFNA21P01568 189 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms