RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 NUBP2Q9Y5Y2 271 aa15.15■□□□□ 0.02
CDC42-204ENST00000411827 VPS13CQ709C8 3753 aa15.15■□□□□ 0.02
CDC42-204ENST00000411827 CSPG4Q6UVK1 2322 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 SLC31A2O15432 143 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 LY6G6DO95868 133 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 IGHV3-7P01780 117 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 TCRBP04435 133 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 SAA4P35542 130 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 RAG2P55895 527 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 CATR1Q13166 79 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 AANATQ16613 207 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 FAM120AOSQ5T036 256 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 TPTE2P1Q5T6R2 138 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 KCTD9Q7L273 389 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 TGIF2LXQ8IUE1 241 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 ODF3L1Q8IXM7 274 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 DRAM1Q8N682 238 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 MINDY2Q8NBR6 621 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 MARCH1Q8TCQ1 289 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 ABHD14BQ96IU4 210 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 FXYD6Q9H0Q3 95 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 ALX4Q9H161 411 aaPredicted RBP15.14■□□□□ 0.01
CDC42-204ENST00000411827 FAM212BQ9NTI7 297 aaPredicted RBP15.14■□□□□ 0.01
CDC42-204ENST00000411827 SDHAF2Q9NX18 166 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 CDC42EP3Q9UKI2 254 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 RNF150Q9ULK6 438 aa15.14■□□□□ 0.01
CDC42-204ENST00000411827 C2CD3Q4AC94 2353 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 SAA2-SAA4A0A096LPE2 208 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 A0A1W2PPE3 182 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 HSD17B6O14756 317 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 SAA2P0DJI9 122 aaPredicted RBP15.13■□□□□ 0.01
CDC42-204ENST00000411827 MC5RP33032 325 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 THBS3P49746 956 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 CCR6P51684 374 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 KLF17Q5JT82 389 aaPredicted RBP15.13■□□□□ 0.01
CDC42-204ENST00000411827 FAM53AQ6NSI3 398 aaPredicted RBP15.13■□□□□ 0.01
CDC42-204ENST00000411827 PLET1Q6UQ28 207 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 CD300LFQ8TDQ1 290 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 MS4A7Q9GZW8 240 aaPredicted RBP15.13■□□□□ 0.01
CDC42-204ENST00000411827 CCL28Q9NRJ3 127 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 PRELID3BQ9Y3B1 194 aa15.13■□□□□ 0.01
CDC42-204ENST00000411827 FBP1P09467 338 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 IGHV4-38-2P0DP08 117 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 RRASP10301 218 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 BRS3P32247 399 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 SRP14P37108 136 aaKnown RBP15.12■□□□□ 0.01
CDC42-204ENST00000411827 KIR2DS2P43631 304 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 UTF1Q5T230 341 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 CENPSQ8N2Z9 138 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 RTN4IP1Q8WWV3 396 aaPredicted RBP15.12■□□□□ 0.01
CDC42-204ENST00000411827 ZNF251Q9BRH9 671 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 SLC2A9Q9NRM0 540 aa15.12■□□□□ 0.01
CDC42-204ENST00000411827 M0R1X1 148 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 IGLV2-14P01704 120 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 DYNLT3P51808 116 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 DLX1P56177 255 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 TMEM128Q5BJH2 165 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 ZNF818PQ6ZRF7 136 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 NRARPQ7Z6K4 114 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 MRGPRFQ96AM1 343 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 MEGF9Q9H1U4 602 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 LIN7CQ9NUP9 197 aaKnown RBP15.11■□□□□ 0.01
CDC42-204ENST00000411827 KCNIP3Q9Y2W7 256 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 ACANP16112 2415 aa15.11■□□□□ 0.01
CDC42-204ENST00000411827 VGLL3A8MV65 326 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 MPPED1O15442 326 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 PGLYRP1O75594 196 aaPredicted RBP15.1■□□□□ 0.01
CDC42-204ENST00000411827 RLN1P04808 185 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 RAB13P51153 203 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 MECP2P51608 486 aaKnown RBP15.1■□□□□ 0.01
CDC42-204ENST00000411827 PIGPP57054 158 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 CBX3Q13185 183 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 HABP2Q14520 560 aaPredicted RBP15.1■□□□□ 0.01
CDC42-204ENST00000411827 DHRS7BQ6IAN0 325 aaPredicted RBP15.1■□□□□ 0.01
CDC42-204ENST00000411827 LDLRAD3Q86YD5 345 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 SGPP2Q8IWX5 399 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 PDZD9Q8IXQ8 264 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 RTBDNQ9BSG5 229 aaPredicted RBP15.1■□□□□ 0.01
CDC42-204ENST00000411827 BEX2Q9BXY8 128 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 C20orf85Q9H1P6 137 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 C5orf66Q9H5L9 145 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 OCEL1Q9H607 264 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 NF1P21359 2839 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 ZANQ9Y493 2812 aa15.1■□□□□ 0.01
CDC42-204ENST00000411827 RBFOX2O43251 390 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDC42-204ENST00000411827 APOA2P02652 100 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 H2AFB2P0C5Z0 115 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 ANXA3P12429 323 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 F2RP25116 425 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 DUTP33316 252 aaKnown RBP15.09■□□□□ 0.01
CDC42-204ENST00000411827 SSX2Q16385 188 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 RTL8BQ17RB0 113 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 SLC25A42Q86VD7 318 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 OR5AN1Q8NGI8 311 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 AIFM2Q9BRQ8 373 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 MARVELD1Q9BSK0 173 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 NUDT15Q9NV35 164 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 VSIG4Q9Y279 399 aa15.09■□□□□ 0.01
CDC42-204ENST00000411827 IGHV1-3A0A0C4DH29 117 aa15.08■□□□□ 0
CDC42-204ENST00000411827 A0A1W2PRD5 423 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms